Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Usp47Q8BY87 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC11.02□□□□□ -0.64
Usp47Q8BY87 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Usp47Q8BY87 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Usp47Q8BY87 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Usp47Q8BY87 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Usp47Q8BY87 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
Usp47Q8BY87 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Usp47Q8BY87 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Usp47Q8BY87 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Usp47Q8BY87 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm12258-201ENSMUST00000093768 2524 ntBASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm23834-201ENSMUST00000104436 129 ntBASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm6490-201ENSMUST00000111862 461 ntBASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm13229-201ENSMUST00000118238 340 ntBASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm11383-201ENSMUST00000121346 807 ntBASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm11188-201ENSMUST00000122382 388 ntBASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm9141-201ENSMUST00000159355 1007 ntBASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm27542-201ENSMUST00000184184 256 ntBASIC11.02□□□□□ -0.65
Usp47Q8BY87 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm18484-201ENSMUST00000204389 991 ntBASIC11.02□□□□□ -0.65
Usp47Q8BY87 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC11.02□□□□□ -0.65
Usp47Q8BY87 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Usp47Q8BY87 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm44423-201ENSMUST00000203746 3158 ntBASIC11.01□□□□□ -0.65
Usp47Q8BY87 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm45634-201ENSMUST00000209736 1990 ntBASIC11.01□□□□□ -0.65
Usp47Q8BY87 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm37956-201ENSMUST00000195208 2010 ntBASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm44228-201ENSMUST00000204888 2026 ntBASIC11.01□□□□□ -0.65
Usp47Q8BY87 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm43609-201ENSMUST00000199084 2712 ntBASIC11.01□□□□□ -0.65
Usp47Q8BY87 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm7763-201ENSMUST00000182220 1006 ntBASIC11.01□□□□□ -0.65
Usp47Q8BY87 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm18797-201ENSMUST00000190809 1174 ntBASIC11.01□□□□□ -0.65
Usp47Q8BY87 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm42938-201ENSMUST00000198414 1072 ntBASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm43542-201ENSMUST00000199505 379 ntBASIC11.01□□□□□ -0.65
Usp47Q8BY87 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Rai14-201ENSMUST00000090339 4909 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Usp47Q8BY87 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Usp47Q8BY87 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Usp47Q8BY87 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Usp47Q8BY87 AC165260.6-202ENSMUST00000224959 1958 ntBASIC11□□□□□ -0.65
Usp47Q8BY87 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC11□□□□□ -0.65
Usp47Q8BY87 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Usp47Q8BY87 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Usp47Q8BY87 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Usp47Q8BY87 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Usp47Q8BY87 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC11□□□□□ -0.65
Usp47Q8BY87 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Usp47Q8BY87 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC11□□□□□ -0.65
Usp47Q8BY87 Gm15160-201ENSMUST00000120553 907 ntBASIC11□□□□□ -0.65
Usp47Q8BY87 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms