Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Trim43aQ3TL54 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Trim43aQ3TL54 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.34□□□□□ -1.08
Trim43aQ3TL54 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Ccdc50-ps-201ENSMUST00000118044 941 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm12206-201ENSMUST00000119795 601 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm15763-201ENSMUST00000120136 403 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm371-201ENSMUST00000142240 1245 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm18301-201ENSMUST00000185261 888 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm37822-201ENSMUST00000192618 1109 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm37611-201ENSMUST00000195250 2028 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm2649-201ENSMUST00000218825 610 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 AC153937.2-202ENSMUST00000219583 670 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm5668-201ENSMUST00000220897 436 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 AC132467.1-201ENSMUST00000226498 1845 ntBASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
Trim43aQ3TL54 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 CT025548.2-201ENSMUST00000226227 1329 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm19028-201ENSMUST00000189614 1873 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 AC140280.1-201ENSMUST00000227826 1847 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm13726-201ENSMUST00000121278 794 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 9530026F06Rik-201ENSMUST00000141000 892 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm16541-201ENSMUST00000160992 614 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm28983-201ENSMUST00000186685 614 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm28150-201ENSMUST00000187305 614 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm28377-201ENSMUST00000189695 720 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm8575-201ENSMUST00000210262 521 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 AC130829.2-201ENSMUST00000222931 127 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm8623-201ENSMUST00000071573 436 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim43aQ3TL54 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms