Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm5721-201ENSMUST00000119845 1696 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm21129-201ENSMUST00000185932 2560 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm29258-201ENSMUST00000186842 2564 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 AC121286.2-201ENSMUST00000218069 2470 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 CT009515.4-201ENSMUST00000228165 1494 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm37022-201ENSMUST00000192517 2254 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Asb14-203ENSMUST00000165929 1817 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 AC117656.3-203ENSMUST00000225007 1809 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 2610037D02Rik-202ENSMUST00000185067 2997 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Mir706-201ENSMUST00000102262 84 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm12073-201ENSMUST00000117382 524 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm8802-201ENSMUST00000118633 740 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm13651-201ENSMUST00000119086 1110 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm15224-201ENSMUST00000120501 388 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm15719-201ENSMUST00000120619 635 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm14200-201ENSMUST00000122256 192 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm12932-201ENSMUST00000143705 620 ntTSL 3 BASIC6.23□□□□□ -1.41
Cdx4Q07424 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm16285-201ENSMUST00000162999 347 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm26977-201ENSMUST00000183151 996 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
Cdx4Q07424 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm8641-201ENSMUST00000186995 826 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm8480-201ENSMUST00000190350 698 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm37024-201ENSMUST00000192224 868 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm7115-201ENSMUST00000193706 832 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm37450-201ENSMUST00000195218 170 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm43218-201ENSMUST00000196275 344 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm4873-201ENSMUST00000199402 1203 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm42584-201ENSMUST00000201404 220 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm19253-201ENSMUST00000204279 307 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 AV026068-225ENSMUST00000225042 490 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 CT030646.1-201ENSMUST00000225049 980 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 AC167013.3-201ENSMUST00000228110 989 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 AC171241.2-201ENSMUST00000228744 892 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 AC166822.2-201ENSMUST00000228746 275 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Olfr1153-201ENSMUST00000052300 957 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Fabp5l2-201ENSMUST00000072582 408 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm22748-201ENSMUST00000082493 136 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 n-R5s28-201ENSMUST00000082814 119 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm26003-201ENSMUST00000083061 113 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm37210-201ENSMUST00000192484 2004 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC6.23□□□□□ -1.41
Cdx4Q07424 Gm43686-201ENSMUST00000197351 2439 ntBASIC6.23□□□□□ -1.41
Cdx4Q07424 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cdx4Q07424 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx4Q07424 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx4Q07424 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Cdx4Q07424 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx4Q07424 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms