Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC7.07□□□□□ -1.28
Col8a1Q00780 AC134913.1-201ENSMUST00000224563 504 ntBASIC7.07□□□□□ -1.28
Col8a1Q00780 AC161877.2-201ENSMUST00000226248 545 ntBASIC7.07□□□□□ -1.28
Col8a1Q00780 AC122251.1-201ENSMUST00000227717 639 ntBASIC7.07□□□□□ -1.28
Col8a1Q00780 Gm14267-208ENSMUST00000228324 1189 ntBASIC7.07□□□□□ -1.28
Col8a1Q00780 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col8a1Q00780 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col8a1Q00780 Gm5471-201ENSMUST00000072732 337 ntBASIC7.07□□□□□ -1.28
Col8a1Q00780 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col8a1Q00780 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col8a1Q00780 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col8a1Q00780 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Mavs-201ENSMUST00000041362 2867 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Lmod2-201ENSMUST00000031694 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Smok2b-202ENSMUST00000162940 2306 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col8a1Q00780 Gm43839-201ENSMUST00000196183 2325 ntBASIC7.07□□□□□ -1.28
Col8a1Q00780 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col8a1Q00780 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC7.07□□□□□ -1.28
Col8a1Q00780 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Muc20-202ENSMUST00000115116 3673 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 AC154300.1-201ENSMUST00000219735 2627 ntTSL 5 BASIC7.07□□□□□ -1.28
Col8a1Q00780 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Olfr1090-203ENSMUST00000217043 2054 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Col8a1Q00780 Lhx6-202ENSMUST00000112961 3292 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Fam50a-201ENSMUST00000114160 1383 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col8a1Q00780 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 2610017A05Rik-201ENSMUST00000204670 1661 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 4933402N03Rik-201ENSMUST00000070980 1826 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Dnm3-203ENSMUST00000159763 1305 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Lage3-203ENSMUST00000114153 1997 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Xndc1-202ENSMUST00000106950 3131 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm15066-201ENSMUST00000120163 2608 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 AC079245.1-201ENSMUST00000215680 1454 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Gramd1c-202ENSMUST00000114677 3271 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Snhg7os-202ENSMUST00000131841 3947 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Pax6-205ENSMUST00000111085 2779 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Col8a1Q00780 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm37258-201ENSMUST00000191734 1627 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm22439-201ENSMUST00000104048 132 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm15989-201ENSMUST00000121895 498 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm12864-201ENSMUST00000122207 1006 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC7.06□□□□□ -1.28
Col8a1Q00780 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm28437-201ENSMUST00000190277 783 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm37241-201ENSMUST00000191736 523 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm37932-201ENSMUST00000192258 1167 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm38078-201ENSMUST00000192771 392 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC7.06□□□□□ -1.28
Col8a1Q00780 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Ighv1-73-201ENSMUST00000197435 352 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm4605-201ENSMUST00000203148 625 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm44987-201ENSMUST00000206578 750 ntTSL 3 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm7972-201ENSMUST00000208434 1137 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.06□□□□□ -1.28
Col8a1Q00780 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm33096-201ENSMUST00000210189 493 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm39164-202ENSMUST00000211519 236 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC7.06□□□□□ -1.28
Col8a1Q00780 AC113107.1-201ENSMUST00000218358 396 ntTSL 3 BASIC7.06□□□□□ -1.28
Col8a1Q00780 AC165349.2-201ENSMUST00000219097 426 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC7.06□□□□□ -1.28
Col8a1Q00780 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 AC121912.1-201ENSMUST00000227525 1201 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 AC125464.1-201ENSMUST00000228013 512 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Olfr888-201ENSMUST00000075228 945 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Mir138-2-201ENSMUST00000083578 71 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm6419-201ENSMUST00000097166 429 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm38359-201ENSMUST00000191884 2225 ntBASIC7.06□□□□□ -1.28
Col8a1Q00780 Olfr1110-202ENSMUST00000152758 3159 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Olfr170-202ENSMUST00000206562 1417 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
Col8a1Q00780 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms