Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 AC160340.1-201ENSMUST00000222952 3964 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Mir675-201ENSMUST00000102320 84 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm14099-201ENSMUST00000117769 605 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Sycn-201ENSMUST00000119180 556 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm16541-201ENSMUST00000160992 614 ntTSL 3 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm29651-201ENSMUST00000189088 697 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm29144-201ENSMUST00000189235 339 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm28973-201ENSMUST00000189310 613 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm29238-201ENSMUST00000189709 695 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm28607-201ENSMUST00000190142 339 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm20802-201ENSMUST00000190832 698 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm28121-201ENSMUST00000191420 339 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Rps3-205ENSMUST00000208532 489 ntTSL 5 BASIC8.93□□□□□ -0.98
Hmgb1P63158 AC162176.1-201ENSMUST00000216490 618 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm2649-201ENSMUST00000218825 610 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC8.93□□□□□ -0.98
Hmgb1P63158 AC158536.1-201ENSMUST00000222510 256 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 AC132317.2-201ENSMUST00000227301 519 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 AC114585.2-203ENSMUST00000228400 339 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm44986-201ENSMUST00000206292 2829 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 AC132467.1-201ENSMUST00000226498 1845 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm8141-201ENSMUST00000190856 1723 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm7364-201ENSMUST00000188760 1501 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Raet1d-202ENSMUST00000182677 1425 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Hmgb1P63158 9230102K24Rik-201ENSMUST00000219459 1303 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC8.92□□□□□ -0.98
Hmgb1P63158 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC8.92□□□□□ -0.98
Hmgb1P63158 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm24236-201ENSMUST00000157794 134 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm6921-201ENSMUST00000161478 435 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm16301-201ENSMUST00000161959 295 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm23162-201ENSMUST00000175081 121 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC8.92□□□□□ -0.98
Hmgb1P63158 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm18552-201ENSMUST00000187425 538 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm28244-201ENSMUST00000189342 356 ntTSL 5 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm17979-201ENSMUST00000196646 611 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm8896-201ENSMUST00000197434 1106 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC8.92□□□□□ -0.98
Hmgb1P63158 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 AC153937.2-202ENSMUST00000219583 670 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Hmgb1P63158 AC122295.1-201ENSMUST00000223476 388 ntBASIC8.92□□□□□ -0.98
Hmgb1P63158 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Hmgb1P63158 Elobl-202ENSMUST00000082339 300 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms