Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm5839-201ENSMUST00000182835 1007 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm37270-201ENSMUST00000194277 330 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm42667-201ENSMUST00000196132 234 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 CT009550.3-201ENSMUST00000228542 455 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 AC137950.1-201ENSMUST00000228553 515 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm37593-201ENSMUST00000191669 3254 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 AC159301.1-202ENSMUST00000225860 2133 ntBASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm37040-201ENSMUST00000191740 1824 ntBASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm26014-201ENSMUST00000104405 132 ntBASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm22149-202ENSMUST00000196259 137 ntBASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm43553-201ENSMUST00000200900 685 ntBASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm9354-201ENSMUST00000209075 468 ntBASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm42899-201ENSMUST00000197034 2667 ntBASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 AC120163.1-201ENSMUST00000228618 1680 ntBASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm45182-201ENSMUST00000207579 2404 ntBASIC9.29□□□□□ -0.92
Nup88Q8CEC0 Gm38331-201ENSMUST00000195719 2671 ntBASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm28720-201ENSMUST00000190728 3156 ntBASIC9.28□□□□□ -0.92
Nup88Q8CEC0 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm45251-201ENSMUST00000209486 1465 ntBASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm12838-201ENSMUST00000116278 325 ntBASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm14519-201ENSMUST00000118490 312 ntBASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm12123-201ENSMUST00000120348 472 ntBASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm13358-201ENSMUST00000121427 569 ntBASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm1947-201ENSMUST00000122451 910 ntBASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Aldh3b3-202ENSMUST00000179433 3827 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm18301-201ENSMUST00000185261 888 ntBASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm8307-201ENSMUST00000187682 1150 ntBASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm9497-201ENSMUST00000199908 538 ntBASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC9.28□□□□□ -0.92
Nup88Q8CEC0 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms