Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC8.95□□□□□ -0.98
Hmgb1P63158 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Hmgb1P63158 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hmgb1P63158 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm5406-201ENSMUST00000120054 766 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm14143-201ENSMUST00000121686 357 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Hmgb1P63158 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC8.95□□□□□ -0.98
Hmgb1P63158 Crem-209ENSMUST00000129435 1160 ntTSL 5 BASIC8.95□□□□□ -0.98
Hmgb1P63158 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm37904-201ENSMUST00000195591 312 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm6522-201ENSMUST00000197160 1203 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm30835-201ENSMUST00000198825 689 ntTSL 3 BASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm43382-201ENSMUST00000198954 838 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm42646-201ENSMUST00000202233 914 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm43934-201ENSMUST00000205095 388 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 AC105169.1-201ENSMUST00000218912 1294 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 AC124356.2-201ENSMUST00000221874 336 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 Tssk4-203ENSMUST00000226497 1235 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 Borcs8-201ENSMUST00000002418 810 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hmgb1P63158 Fabp5l2-201ENSMUST00000072582 408 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 Mir187-201ENSMUST00000083598 61 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hmgb1P63158 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Hmgb1P63158 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Hmgb1P63158 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.98
Hmgb1P63158 CT025548.2-201ENSMUST00000226227 1329 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm44675-201ENSMUST00000208188 2927 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 AC154738.6-201ENSMUST00000227225 1352 ntBASIC8.95□□□□□ -0.98
Hmgb1P63158 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hmgb1P63158 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Hmgb1P63158 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hmgb1P63158 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hmgb1P63158 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC8.95□□□□□ -0.98
Hmgb1P63158 Gm37258-201ENSMUST00000191734 1627 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm17229-202ENSMUST00000166792 1753 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm9434-201ENSMUST00000118975 813 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm23598-201ENSMUST00000157262 144 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm8407-201ENSMUST00000192719 427 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Trbv27-201ENSMUST00000193711 277 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm18988-201ENSMUST00000205601 746 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Nbdy-206ENSMUST00000208373 1061 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm8689-201ENSMUST00000218709 712 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 AC165281.1-201ENSMUST00000225713 1011 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Hmgb1P63158 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 AC158981.2-201ENSMUST00000227565 1537 ntBASIC8.94□□□□□ -0.98
Hmgb1P63158 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Hmgb1P63158 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC8.94□□□□□ -0.98
Hmgb1P63158 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Hmgb1P63158 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC8.93□□□□□ -0.98
Hmgb1P63158 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Hmgb1P63158 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC8.93□□□□□ -0.98
Hmgb1P63158 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms