Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC11.95□□□□□ -0.5
Cux1P53564 Gm7972-201ENSMUST00000208434 1137 ntBASIC11.95□□□□□ -0.5
Cux1P53564 AC151904.5-201ENSMUST00000218975 549 ntBASIC11.95□□□□□ -0.5
Cux1P53564 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cux1P53564 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cux1P53564 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC11.95□□□□□ -0.5
Cux1P53564 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC11.95□□□□□ -0.5
Cux1P53564 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cux1P53564 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cux1P53564 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cux1P53564 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cux1P53564 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cux1P53564 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cux1P53564 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cux1P53564 Olfr6-202ENSMUST00000213552 4349 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cux1P53564 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cux1P53564 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Cux1P53564 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cux1P53564 Clasp1-221ENSMUST00000191823 3916 ntTSL 5 BASIC11.94□□□□□ -0.5
Cux1P53564 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cux1P53564 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cux1P53564 Gm12634-201ENSMUST00000122157 992 ntBASIC11.94□□□□□ -0.5
Cux1P53564 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cux1P53564 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Cux1P53564 Gm27218-201ENSMUST00000183745 392 ntBASIC11.94□□□□□ -0.5
Cux1P53564 Gm38056-201ENSMUST00000193928 5027 ntBASIC11.94□□□□□ -0.5
Cux1P53564 Gm43287-201ENSMUST00000197747 600 ntBASIC11.94□□□□□ -0.5
Cux1P53564 Gm44192-201ENSMUST00000204195 556 ntBASIC11.94□□□□□ -0.5
Cux1P53564 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC11.94□□□□□ -0.5
Cux1P53564 Gm30646-201ENSMUST00000207662 180 ntBASIC11.94□□□□□ -0.5
Cux1P53564 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC11.94□□□□□ -0.5
Cux1P53564 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cux1P53564 Fam212b-201ENSMUST00000066610 4701 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cux1P53564 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC11.94□□□□□ -0.5
Cux1P53564 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cux1P53564 Gm44835-201ENSMUST00000205544 3181 ntBASIC11.94□□□□□ -0.5
Cux1P53564 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC11.94□□□□□ -0.5
Cux1P53564 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cux1P53564 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Pde6a-201ENSMUST00000025468 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cux1P53564 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cux1P53564 Gm29761-201ENSMUST00000215964 1939 ntBASIC11.93□□□□□ -0.5
Cux1P53564 Trim2-201ENSMUST00000054990 3816 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Cux1P53564 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cux1P53564 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC11.93□□□□□ -0.5
Cux1P53564 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC11.93□□□□□ -0.5
Cux1P53564 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC11.93□□□□□ -0.5
Cux1P53564 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC11.93□□□□□ -0.5
Cux1P53564 Gm24050-201ENSMUST00000158623 290 ntBASIC11.93□□□□□ -0.5
Cux1P53564 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Gm7341-201ENSMUST00000192183 926 ntBASIC11.93□□□□□ -0.5
Cux1P53564 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC11.93□□□□□ -0.5
Cux1P53564 Gm8539-201ENSMUST00000199822 501 ntBASIC11.93□□□□□ -0.5
Cux1P53564 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cux1P53564 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cux1P53564 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Cux1P53564 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cux1P53564 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC11.93□□□□□ -0.5
Cux1P53564 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cux1P53564 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cux1P53564 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Cux1P53564 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 4933427D14Rik-202ENSMUST00000108506 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Gm42546-201ENSMUST00000201584 2592 ntBASIC11.92□□□□□ -0.5
Cux1P53564 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cux1P53564 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cux1P53564 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Cux1P53564 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cux1P53564 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cux1P53564 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cux1P53564 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cux1P53564 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC11.92□□□□□ -0.5
Cux1P53564 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC11.92□□□□□ -0.5
Cux1P53564 Ighv1-29-201ENSMUST00000194116 342 ntBASIC11.92□□□□□ -0.5
Cux1P53564 Gm43906-201ENSMUST00000203194 906 ntBASIC11.92□□□□□ -0.5
Cux1P53564 Gm8575-201ENSMUST00000210262 521 ntBASIC11.92□□□□□ -0.5
Cux1P53564 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC11.92□□□□□ -0.5
Cux1P53564 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC11.92□□□□□ -0.5
Cux1P53564 AC124103.1-201ENSMUST00000227564 1027 ntBASIC11.92□□□□□ -0.5
Cux1P53564 Glycam1-204ENSMUST00000228895 641 ntBASIC11.92□□□□□ -0.5
Cux1P53564 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Mkrn2-201ENSMUST00000000449 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cux1P53564 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms