Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
CopeO89079 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.01□□□□□ -1.13
CopeO89079 CT009711.1-201ENSMUST00000223992 3040 ntBASIC8.01□□□□□ -1.13
CopeO89079 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC8.01□□□□□ -1.13
CopeO89079 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
CopeO89079 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
CopeO89079 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CopeO89079 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CopeO89079 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC8.01□□□□□ -1.13
CopeO89079 Gm14528-201ENSMUST00000120615 231 ntBASIC8.01□□□□□ -1.13
CopeO89079 Gm5389-201ENSMUST00000120893 1176 ntBASIC8.01□□□□□ -1.13
CopeO89079 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC8.01□□□□□ -1.13
CopeO89079 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.01□□□□□ -1.13
CopeO89079 Gm38247-201ENSMUST00000194675 433 ntBASIC8.01□□□□□ -1.13
CopeO89079 Gm17977-201ENSMUST00000198743 574 ntBASIC8.01□□□□□ -1.13
CopeO89079 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC8.01□□□□□ -1.13
CopeO89079 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.01□□□□□ -1.13
CopeO89079 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CopeO89079 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CopeO89079 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CopeO89079 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
CopeO89079 Gm37210-201ENSMUST00000192484 2004 ntBASIC8.01□□□□□ -1.13
CopeO89079 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
CopeO89079 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.01□□□□□ -1.13
CopeO89079 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Gm29113-201ENSMUST00000185991 3432 ntBASIC8.01□□□□□ -1.13
CopeO89079 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CopeO89079 Gm43537-201ENSMUST00000199064 3110 ntBASIC8□□□□□ -1.13
CopeO89079 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CopeO89079 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
CopeO89079 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CopeO89079 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
CopeO89079 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CopeO89079 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CopeO89079 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8□□□□□ -1.13
CopeO89079 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CopeO89079 Gm8832-201ENSMUST00000119890 395 ntBASIC8□□□□□ -1.13
CopeO89079 Gm12692-201ENSMUST00000121092 546 ntBASIC8□□□□□ -1.13
CopeO89079 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
CopeO89079 Gm22388-201ENSMUST00000158194 248 ntBASIC8□□□□□ -1.13
CopeO89079 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8□□□□□ -1.13
CopeO89079 Gm16580-201ENSMUST00000162696 1044 ntBASIC8□□□□□ -1.13
CopeO89079 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC8□□□□□ -1.13
CopeO89079 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC8□□□□□ -1.13
CopeO89079 Gm29517-201ENSMUST00000190744 351 ntBASIC8□□□□□ -1.13
CopeO89079 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC8□□□□□ -1.13
CopeO89079 Gm43471-201ENSMUST00000197550 467 ntBASIC8□□□□□ -1.13
CopeO89079 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CopeO89079 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC8□□□□□ -1.13
CopeO89079 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC8□□□□□ -1.13
CopeO89079 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC8□□□□□ -1.13
CopeO89079 Gm9110-201ENSMUST00000219035 617 ntBASIC8□□□□□ -1.13
CopeO89079 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC8□□□□□ -1.13
CopeO89079 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC8□□□□□ -1.13
CopeO89079 Gm6083-201ENSMUST00000075518 357 ntBASIC8□□□□□ -1.13
CopeO89079 Gm24696-201ENSMUST00000083878 134 ntBASIC8□□□□□ -1.13
CopeO89079 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
CopeO89079 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CopeO89079 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC8□□□□□ -1.13
CopeO89079 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8□□□□□ -1.13
CopeO89079 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
CopeO89079 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
CopeO89079 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
CopeO89079 Gm43196-201ENSMUST00000201762 2114 ntBASIC8□□□□□ -1.13
CopeO89079 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CopeO89079 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
CopeO89079 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CopeO89079 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
CopeO89079 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CopeO89079 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
CopeO89079 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CopeO89079 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC7.99□□□□□ -1.13
CopeO89079 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC7.99□□□□□ -1.13
CopeO89079 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CopeO89079 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC7.99□□□□□ -1.13
CopeO89079 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC7.99□□□□□ -1.13
CopeO89079 Gm13526-201ENSMUST00000117970 189 ntBASIC7.99□□□□□ -1.13
CopeO89079 Gm12310-201ENSMUST00000118013 492 ntBASIC7.99□□□□□ -1.13
CopeO89079 Gm9434-201ENSMUST00000118975 813 ntBASIC7.99□□□□□ -1.13
CopeO89079 Gm12955-201ENSMUST00000119689 957 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms