Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Hmgb3O54879 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm44187-201ENSMUST00000204735 1929 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm37168-201ENSMUST00000192965 1452 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm24048-201ENSMUST00000102411 106 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm23127-201ENSMUST00000104261 130 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC6.37□□□□□ -1.39
Hmgb3O54879 Ms4a3-201ENSMUST00000112984 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Pcna-ps1-201ENSMUST00000118453 738 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm12312-201ENSMUST00000120351 644 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm13049-201ENSMUST00000133196 757 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Mir1964-201ENSMUST00000158514 83 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm28723-201ENSMUST00000188640 1001 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm38358-201ENSMUST00000195144 428 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm19102-201ENSMUST00000201133 553 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm8667-201ENSMUST00000211112 449 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC6.37□□□□□ -1.39
Hmgb3O54879 AC167019.2-201ENSMUST00000227335 845 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Hmgb3O54879 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Hmgb3O54879 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Hmgb3O54879 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Hmgb3O54879 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Hmgb3O54879 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.37□□□□□ -1.39
Hmgb3O54879 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hmgb3O54879 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Homer1-201ENSMUST00000060490 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm21043-201ENSMUST00000199316 1517 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Ccr6-206ENSMUST00000180103 1425 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm44746-201ENSMUST00000205565 1349 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm25502-201ENSMUST00000104428 131 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm14410-201ENSMUST00000108964 912 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm14336-201ENSMUST00000117491 475 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm13352-201ENSMUST00000117515 262 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Tle6-213ENSMUST00000151858 627 ntTSL 3 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm20447-201ENSMUST00000173290 599 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm20451-201ENSMUST00000173452 273 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm18822-201ENSMUST00000182857 1025 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Mir8100-201ENSMUST00000184230 121 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm17979-201ENSMUST00000196646 611 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm42821-201ENSMUST00000199771 489 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm45866-201ENSMUST00000212425 326 ntTSL 3 BASIC6.36□□□□□ -1.39
Hmgb3O54879 AC159899.1-201ENSMUST00000214024 733 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm3011-201ENSMUST00000215669 582 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 AC108416.3-201ENSMUST00000226148 557 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 AC114585.2-203ENSMUST00000228400 339 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Olfr543-201ENSMUST00000061482 1130 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Olfr38-201ENSMUST00000074499 954 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Hmgb3O54879 L3mbtl3-203ENSMUST00000174766 3411 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Gm19028-201ENSMUST00000189614 1873 ntBASIC6.36□□□□□ -1.39
Hmgb3O54879 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Hmgb3O54879 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hmgb3O54879 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms