Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clrn1Q8K445 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Clrn1Q8K445 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Clrn1Q8K445 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clrn1Q8K445 Gm36993-201ENSMUST00000192983 2980 ntBASIC7.58□□□□□ -1.2
Clrn1Q8K445 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Clrn1Q8K445 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Clrn1Q8K445 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Clrn1Q8K445 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.58□□□□□ -1.2
Clrn1Q8K445 Aldoart1-202ENSMUST00000179234 2050 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Clrn1Q8K445 Gm3742-201ENSMUST00000220907 1391 ntBASIC7.58□□□□□ -1.2
Clrn1Q8K445 Gm6284-201ENSMUST00000209609 4287 ntBASIC7.58□□□□□ -1.2
Clrn1Q8K445 Gm43800-201ENSMUST00000201868 2731 ntBASIC7.58□□□□□ -1.2
Clrn1Q8K445 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Clrn1Q8K445 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Clrn1Q8K445 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 AC164437.4-204ENSMUST00000227169 4024 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm43341-201ENSMUST00000200104 1308 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm12931-201ENSMUST00000117046 324 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm29041-201ENSMUST00000189199 380 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm44451-201ENSMUST00000203767 483 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm7482-201ENSMUST00000206446 505 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm7588-201ENSMUST00000216866 571 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm17611-202ENSMUST00000220613 814 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 AL645704.1-201ENSMUST00000221642 604 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 CT009515.2-201ENSMUST00000226126 736 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Mir30c-1-201ENSMUST00000083556 89 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 AC120163.1-201ENSMUST00000228618 1680 ntBASIC7.57□□□□□ -1.2
Clrn1Q8K445 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Gm26649-201ENSMUST00000181595 3196 ntTSL 5 BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Clrn1Q8K445 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Tex24-201ENSMUST00000095375 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Bcas3-204ENSMUST00000108056 2925 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC7.56□□□□□ -1.2
Clrn1Q8K445 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm11348-201ENSMUST00000118813 318 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm6798-201ENSMUST00000119961 360 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm5883-201ENSMUST00000120735 495 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm14840-201ENSMUST00000122135 594 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm23094-201ENSMUST00000157551 322 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm23116-201ENSMUST00000158481 67 ntBASIC7.56□□□□□ -1.2
Clrn1Q8K445 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Clrn1Q8K445 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms