Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm12394-201ENSMUST00000107981 3348 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Mir688-201ENSMUST00000102055 75 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm23131-201ENSMUST00000104253 132 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm13458-201ENSMUST00000118239 367 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm15192-201ENSMUST00000121005 293 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm15079-201ENSMUST00000121943 216 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm16031-201ENSMUST00000153253 448 ntTSL 2 BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm23222-201ENSMUST00000158117 76 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm27617-201ENSMUST00000184321 168 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 AC137678.1-201ENSMUST00000198370 118 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm26413-202ENSMUST00000198972 127 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm5981-201ENSMUST00000199912 487 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm43934-201ENSMUST00000205095 388 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm3774-201ENSMUST00000209773 435 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm21321-201ENSMUST00000220179 446 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm35147-201ENSMUST00000208383 1820 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Rian-209ENSMUST00000182406 3476 ntBASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Tex24-201ENSMUST00000095375 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Nup88Q8CEC0 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm12608-201ENSMUST00000122013 1715 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm45534-201ENSMUST00000211449 2339 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm13651-201ENSMUST00000119086 1110 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm13224-201ENSMUST00000119586 94 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm25277-201ENSMUST00000157266 324 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm29144-201ENSMUST00000189235 339 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm29238-201ENSMUST00000189709 695 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm28607-201ENSMUST00000190142 339 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm28121-201ENSMUST00000191420 339 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm29462-201ENSMUST00000191458 288 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Gm29977-201ENSMUST00000206804 724 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 AC092710.1-201ENSMUST00000221005 192 ntBASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Lppos-201ENSMUST00000181640 1603 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nup88Q8CEC0 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm37326-201ENSMUST00000192828 3071 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 AC132384.4-201ENSMUST00000220343 1397 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Phf7-206ENSMUST00000228437 1373 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm25273-201ENSMUST00000104295 115 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm24071-201ENSMUST00000104520 132 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm15028-201ENSMUST00000120295 370 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm12402-201ENSMUST00000120536 334 ntBASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC9.3□□□□□ -0.92
Nup88Q8CEC0 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 131.1 ms