Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm11259-201ENSMUST00000120554 715 ntBASIC9.17□□□□□ -0.94
Alx1Q8C8B0 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm29143-201ENSMUST00000189462 201 ntBASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Smcr8-202ENSMUST00000102667 3544 ntBASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm44423-201ENSMUST00000203746 3158 ntBASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Alx1Q8C8B0 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm43430-201ENSMUST00000196513 3897 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm6729-201ENSMUST00000165173 1452 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm42907-201ENSMUST00000199793 2148 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm8995-202ENSMUST00000208417 3490 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Mir763-201ENSMUST00000103249 120 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm5228-201ENSMUST00000117186 357 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm15047-201ENSMUST00000118891 454 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm5406-201ENSMUST00000120054 766 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm11809-201ENSMUST00000120923 950 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm16276-201ENSMUST00000131218 262 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm23117-201ENSMUST00000158482 108 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm7707-201ENSMUST00000165950 1156 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Mir8099-2-201ENSMUST00000183568 127 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Mir8099-1-201ENSMUST00000184238 127 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm28239-201ENSMUST00000190225 447 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm4545-201ENSMUST00000190797 603 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC9.16□□□□□ -0.94
Alx1Q8C8B0 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Eftud2-201ENSMUST00000021306 3324 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC9.16□□□□□ -0.94
Alx1Q8C8B0 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Gm13552-201ENSMUST00000118837 417 ntBASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Gm12727-201ENSMUST00000119885 359 ntBASIC9.15□□□□□ -0.94
Alx1Q8C8B0 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Gm8164-201ENSMUST00000169120 1192 ntBASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Alx1Q8C8B0 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms