Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Gm6100-201ENSMUST00000180253 403 ntBASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Gm29739-201ENSMUST00000191760 529 ntBASIC10□□□□□ -0.81
Ccdc60Q8C4J0 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 CT009546.3-201ENSMUST00000220914 208 ntBASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Gm8836-201ENSMUST00000198196 1348 ntBASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Gm43158-201ENSMUST00000198484 1555 ntBASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccdc60Q8C4J0 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm37633-201ENSMUST00000192858 2700 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm11443-201ENSMUST00000118790 479 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm9378-201ENSMUST00000120315 471 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm11585-201ENSMUST00000120901 569 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm12692-201ENSMUST00000121092 546 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm14749-201ENSMUST00000121269 333 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm15928-201ENSMUST00000122455 280 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm4246-201ENSMUST00000172822 216 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm29126-201ENSMUST00000188686 151 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm43560-201ENSMUST00000198100 773 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 AC137678.1-201ENSMUST00000198370 118 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm4898-201ENSMUST00000218519 832 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm18619-201ENSMUST00000222722 1147 ntBASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccdc60Q8C4J0 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm8428-201ENSMUST00000159919 1784 ntBASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm44014-201ENSMUST00000205150 1509 ntBASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm4918-201ENSMUST00000119420 1084 ntBASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm12967-201ENSMUST00000122147 289 ntBASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm26505-201ENSMUST00000176208 166 ntBASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 2610016A17Rik-203ENSMUST00000188711 515 ntTSL 2 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm42472-201ENSMUST00000201626 859 ntBASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC9.98□□□□□ -0.81
Ccdc60Q8C4J0 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms