Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm22927-201ENSMUST00000104268 131 ntBASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm13526-201ENSMUST00000117970 189 ntBASIC9.43□□□□□ -0.9
Vps54Q5SPW0 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm9451-201ENSMUST00000188491 604 ntBASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm44721-201ENSMUST00000206978 472 ntBASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Vps54Q5SPW0 Gm42576-201ENSMUST00000202336 2846 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 AC122426.1-201ENSMUST00000214736 2235 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Gm22022-201ENSMUST00000104355 127 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Gm24373-201ENSMUST00000104393 132 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Gm13552-201ENSMUST00000118837 417 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Gm16407-201ENSMUST00000122134 567 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Mir3072-201ENSMUST00000175610 83 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Gm8304-201ENSMUST00000185744 584 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Gm27680-202ENSMUST00000199221 807 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Gm5307-201ENSMUST00000204772 760 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 CT572999.1-201ENSMUST00000220315 1260 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 AC157571.1-201ENSMUST00000222014 520 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Gm10513-201ENSMUST00000194203 6468 ntBASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Vps54Q5SPW0 Gm37633-201ENSMUST00000192858 2700 ntBASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm8107-201ENSMUST00000117477 2009 ntBASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm12123-201ENSMUST00000120348 472 ntBASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm12692-201ENSMUST00000121092 546 ntBASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Mir3085-201ENSMUST00000175493 89 ntBASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Mir8110-201ENSMUST00000183771 97 ntBASIC9.41□□□□□ -0.9
Vps54Q5SPW0 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm38078-201ENSMUST00000192771 392 ntBASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm43815-201ENSMUST00000197676 990 ntBASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 AC158531.2-201ENSMUST00000224264 473 ntBASIC9.41□□□□□ -0.9
Vps54Q5SPW0 AC099629.1-201ENSMUST00000226778 464 ntBASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Vps54Q5SPW0 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gm37326-201ENSMUST00000192828 3071 ntBASIC9.4□□□□□ -0.9
Vps54Q5SPW0 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms