Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Gm45294-201ENSMUST00000210685 2102 ntBASIC6.26□□□□□ -1.41
Cdx4Q07424 4930425K24Rik-201ENSMUST00000222054 2143 ntBASIC6.26□□□□□ -1.41
Cdx4Q07424 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Dnajc28-204ENSMUST00000169982 3535 ntAPPRIS P4 TSL 2 BASIC6.26□□□□□ -1.41
Cdx4Q07424 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Trps1-205ENSMUST00000183997 3627 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdx4Q07424 Gm17137-201ENSMUST00000164106 4371 ntBASIC6.26□□□□□ -1.41
Cdx4Q07424 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdx4Q07424 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdx4Q07424 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Cdx4Q07424 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Oog4-201ENSMUST00000061277 1981 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Cdx4Q07424 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm43216-201ENSMUST00000196295 1333 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 AC151904.4-201ENSMUST00000219868 1319 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC6.25□□□□□ -1.41
Cdx4Q07424 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm20541-201ENSMUST00000173035 1406 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Dgkh-206ENSMUST00000228362 3308 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm44873-201ENSMUST00000208490 3428 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Trappc12-202ENSMUST00000168129 3230 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm25502-201ENSMUST00000104428 131 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm5406-201ENSMUST00000120054 766 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm11258-201ENSMUST00000121086 1218 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm25843-201ENSMUST00000122582 314 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm12320-201ENSMUST00000127333 1182 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm12496-201ENSMUST00000154377 668 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm37005-201ENSMUST00000193281 1164 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm7546-202ENSMUST00000211354 275 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm8838-201ENSMUST00000212978 541 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 AC166358.1-201ENSMUST00000220677 105 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 AC153662.2-201ENSMUST00000221097 120 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 AC156037.2-201ENSMUST00000221284 112 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 AC166341.6-201ENSMUST00000221528 105 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 AC192334.3-201ENSMUST00000221828 569 ntTSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 CT030242.1-201ENSMUST00000221945 125 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 AC124772.2-201ENSMUST00000222049 154 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 AC153663.1-201ENSMUST00000222165 120 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm8616-201ENSMUST00000222175 1037 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 CT030157.1-201ENSMUST00000222355 148 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 AC150661.2-201ENSMUST00000222418 105 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm5789-201ENSMUST00000222643 865 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Zfp637-211ENSMUST00000223041 1128 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 AC127242.2-201ENSMUST00000223138 148 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 AC124397.1-201ENSMUST00000224296 653 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 AC163638.1-201ENSMUST00000224818 392 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdx4Q07424 E030024N20Rik-201ENSMUST00000075293 494 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Tmem241-203ENSMUST00000092075 595 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
Cdx4Q07424 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Cdx4Q07424 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Cdx4Q07424 Gm11868-201ENSMUST00000121594 1478 ntBASIC6.25□□□□□ -1.41
Cdx4Q07424 Mageb2-202ENSMUST00000201779 1551 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms