Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
BdnfP21237 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
BdnfP21237 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.74□□□□□ -1.17
BdnfP21237 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
BdnfP21237 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
BdnfP21237 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
BdnfP21237 Teddm1a-201ENSMUST00000050660 1317 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
BdnfP21237 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC7.74□□□□□ -1.17
BdnfP21237 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
BdnfP21237 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
BdnfP21237 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
BdnfP21237 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.74□□□□□ -1.17
BdnfP21237 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
BdnfP21237 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
BdnfP21237 Gm25594-201ENSMUST00000102274 82 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Rpl23a-ps3-201ENSMUST00000104925 468 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Gm11875-201ENSMUST00000118187 799 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Gm15539-201ENSMUST00000118452 566 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Sycn-201ENSMUST00000119180 556 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Gm12178-201ENSMUST00000120545 330 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Gm13576-201ENSMUST00000120851 778 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Gm14983-201ENSMUST00000121551 323 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Cox6c-201ENSMUST00000014457 503 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Gm11707-201ENSMUST00000150366 490 ntTSL 3 BASIC7.73□□□□□ -1.17
BdnfP21237 Gm25551-201ENSMUST00000158082 103 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Gm8065-201ENSMUST00000164048 605 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Gm8868-201ENSMUST00000173591 577 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC7.73□□□□□ -1.17
BdnfP21237 4930474B08Rik-201ENSMUST00000194161 837 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Gm42628-201ENSMUST00000198498 764 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Spa17-201ENSMUST00000002013 696 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Rps3-205ENSMUST00000208532 489 ntTSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
BdnfP21237 Gm8171-201ENSMUST00000217443 720 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Gm8689-201ENSMUST00000218709 712 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC7.73□□□□□ -1.17
BdnfP21237 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 Gm5789-201ENSMUST00000222643 865 ntBASIC7.73□□□□□ -1.17
BdnfP21237 AC124103.1-201ENSMUST00000227564 1027 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
BdnfP21237 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Gm10335-201ENSMUST00000096020 468 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Gm10132-201ENSMUST00000099431 468 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC7.73□□□□□ -1.17
BdnfP21237 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Gm42766-201ENSMUST00000200233 1332 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
BdnfP21237 Gm37886-201ENSMUST00000195349 1513 ntBASIC7.73□□□□□ -1.17
BdnfP21237 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC7.73□□□□□ -1.17
BdnfP21237 Gm8605-201ENSMUST00000221619 1370 ntBASIC7.72□□□□□ -1.17
BdnfP21237 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
BdnfP21237 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
BdnfP21237 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
BdnfP21237 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
BdnfP21237 L3mbtl3-202ENSMUST00000105519 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
BdnfP21237 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
BdnfP21237 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
BdnfP21237 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.72□□□□□ -1.17
BdnfP21237 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.72□□□□□ -1.17
BdnfP21237 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.72□□□□□ -1.17
BdnfP21237 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC7.72□□□□□ -1.17
BdnfP21237 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
BdnfP21237 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
BdnfP21237 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
BdnfP21237 Gm7645-201ENSMUST00000119008 788 ntBASIC7.72□□□□□ -1.17
BdnfP21237 Gm13005-201ENSMUST00000119518 585 ntBASIC7.72□□□□□ -1.17
BdnfP21237 Gm15571-201ENSMUST00000119887 637 ntBASIC7.72□□□□□ -1.17
BdnfP21237 Gm5406-201ENSMUST00000120054 766 ntBASIC7.72□□□□□ -1.17
BdnfP21237 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC7.72□□□□□ -1.17
BdnfP21237 Gm13466-201ENSMUST00000121515 999 ntBASIC7.72□□□□□ -1.17
BdnfP21237 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
BdnfP21237 Gm14089-201ENSMUST00000130025 318 ntTSL 3 BASIC7.72□□□□□ -1.17
BdnfP21237 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC7.72□□□□□ -1.17
BdnfP21237 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
BdnfP21237 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms