Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Syngap1F6SEU4 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Syngap1F6SEU4 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Syngap1F6SEU4 Spred1-202ENSMUST00000110901 1440 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Syngap1F6SEU4 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Syngap1F6SEU4 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Mir503-201ENSMUST00000102168 71 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm24257-201ENSMUST00000104472 131 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm4853-201ENSMUST00000119359 394 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm37729-201ENSMUST00000194761 1172 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 CT025561.1-201ENSMUST00000214972 674 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm5619-201ENSMUST00000071172 760 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Ndrg1-201ENSMUST00000005256 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Lrrc49-210ENSMUST00000166168 2784 ntTSL 5 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 AC165260.6-204ENSMUST00000225571 3508 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm18637-201ENSMUST00000217665 1900 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm13106-201ENSMUST00000119045 1443 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm16433-201ENSMUST00000062429 1984 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm37069-201ENSMUST00000192742 4142 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Smcr8-202ENSMUST00000102667 3544 ntBASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Syngap1F6SEU4 Gm13183-201ENSMUST00000118615 789 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm12920-201ENSMUST00000121818 1186 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm18779-201ENSMUST00000173444 577 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm28885-201ENSMUST00000185615 563 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm9142-201ENSMUST00000187161 955 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 AC147096.1-201ENSMUST00000227648 352 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Zfp820-201ENSMUST00000084141 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm10513-201ENSMUST00000194203 6468 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 AC159379.2-201ENSMUST00000220244 2482 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Olfr169-202ENSMUST00000215040 2316 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm37863-201ENSMUST00000194911 1457 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm22438-201ENSMUST00000104049 132 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm13038-201ENSMUST00000119886 459 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm13430-201ENSMUST00000121366 288 ntBASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC9.05□□□□□ -0.96
Syngap1F6SEU4 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms