Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.93■□□□□ 0.62
Speer3W4VSP1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Speer3W4VSP1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Speer3W4VSP1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Speer3W4VSP1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Speer3W4VSP1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Speer3W4VSP1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Speer3W4VSP1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Speer3W4VSP1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Speer3W4VSP1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Speer3W4VSP1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Speer3W4VSP1 Gm45417-201ENSMUST00000209533 758 ntBASIC18.92■□□□□ 0.62
Speer3W4VSP1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.92■□□□□ 0.62
Speer3W4VSP1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Speer3W4VSP1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Speer3W4VSP1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.92■□□□□ 0.62
Speer3W4VSP1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Speer3W4VSP1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Speer3W4VSP1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Speer3W4VSP1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Speer3W4VSP1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Speer3W4VSP1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.9■□□□□ 0.62
Speer3W4VSP1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Speer3W4VSP1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Speer3W4VSP1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
Speer3W4VSP1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.89■□□□□ 0.61
Speer3W4VSP1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Speer3W4VSP1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Speer3W4VSP1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Speer3W4VSP1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Speer3W4VSP1 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.89■□□□□ 0.61
Speer3W4VSP1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Speer3W4VSP1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Speer3W4VSP1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Speer3W4VSP1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Speer3W4VSP1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Speer3W4VSP1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Speer3W4VSP1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.88■□□□□ 0.61
Speer3W4VSP1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Speer3W4VSP1 BC021767-201ENSMUST00000126387 1716 ntBASIC18.88■□□□□ 0.61
Speer3W4VSP1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Speer3W4VSP1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.87■□□□□ 0.61
Speer3W4VSP1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.87■□□□□ 0.61
Speer3W4VSP1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Speer3W4VSP1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms