Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Crlf3Q9Z2L7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Crlf3Q9Z2L7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Crlf3Q9Z2L7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Crlf3Q9Z2L7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Crlf3Q9Z2L7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.83■□□□□ 0.61
Crlf3Q9Z2L7 Gm12821-201ENSMUST00000120022 600 ntBASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Gm27454-201ENSMUST00000185090 204 ntBASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf3Q9Z2L7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf3Q9Z2L7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crlf3Q9Z2L7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crlf3Q9Z2L7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Crlf3Q9Z2L7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Gm45417-201ENSMUST00000209533 758 ntBASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Crlf3Q9Z2L7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf3Q9Z2L7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms