Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdh17Q9R100 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.21■□□□□ 0.51
Cdh17Q9R100 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Cdh17Q9R100 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh17Q9R100 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh17Q9R100 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh17Q9R100 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh17Q9R100 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh17Q9R100 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.2■□□□□ 0.5
Cdh17Q9R100 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cdh17Q9R100 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cdh17Q9R100 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh17Q9R100 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.2■□□□□ 0.5
Cdh17Q9R100 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.2■□□□□ 0.5
Cdh17Q9R100 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.2■□□□□ 0.5
Cdh17Q9R100 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdh17Q9R100 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdh17Q9R100 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cdh17Q9R100 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.18■□□□□ 0.5
Cdh17Q9R100 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdh17Q9R100 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdh17Q9R100 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cdh17Q9R100 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.16■□□□□ 0.5
Cdh17Q9R100 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh17Q9R100 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh17Q9R100 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh17Q9R100 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh17Q9R100 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh17Q9R100 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cdh17Q9R100 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh17Q9R100 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh17Q9R100 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh17Q9R100 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.15■□□□□ 0.5
Cdh17Q9R100 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cdh17Q9R100 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh17Q9R100 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh17Q9R100 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh17Q9R100 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms