Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Gm27454-201ENSMUST00000185090 204 ntBASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Copb1Q9JIF7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Copb1Q9JIF7 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.42■□□□□ 0.86
Copb1Q9JIF7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Copb1Q9JIF7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Copb1Q9JIF7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Copb1Q9JIF7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Copb1Q9JIF7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Copb1Q9JIF7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Copb1Q9JIF7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.42■□□□□ 0.86
Copb1Q9JIF7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Gm6139-201ENSMUST00000079261 882 ntBASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Copb1Q9JIF7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Gm12821-201ENSMUST00000120022 600 ntBASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Gm40848-201ENSMUST00000221998 324 ntBASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Copb1Q9JIF7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Copb1Q9JIF7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Copb1Q9JIF7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Copb1Q9JIF7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Copb1Q9JIF7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Copb1Q9JIF7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Copb1Q9JIF7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.37■□□□□ 0.85
Copb1Q9JIF7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms