Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Gm9988-201ENSMUST00000069786 435 ntBASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tubb3Q9ERD7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Gm27801-201ENSMUST00000184174 223 ntBASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Gm10033-202ENSMUST00000211874 928 ntBASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tubb3Q9ERD7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubb3Q9ERD7 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.53■□□□□ 0.56
Tubb3Q9ERD7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tubb3Q9ERD7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubb3Q9ERD7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubb3Q9ERD7 Gm29257-201ENSMUST00000186115 639 ntBASIC18.53■□□□□ 0.56
Tubb3Q9ERD7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.53■□□□□ 0.56
Tubb3Q9ERD7 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.53■□□□□ 0.56
Tubb3Q9ERD7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tubb3Q9ERD7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Tubb3Q9ERD7 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.53■□□□□ 0.56
Tubb3Q9ERD7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tubb3Q9ERD7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tubb3Q9ERD7 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.52■□□□□ 0.55
Tubb3Q9ERD7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tubb3Q9ERD7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tubb3Q9ERD7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 AV356131-201ENSMUST00000206201 750 ntBASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tubb3Q9ERD7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tubb3Q9ERD7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tubb3Q9ERD7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms