Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Upf1Q9EPU0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.46■■□□□ 1.03
Upf1Q9EPU0 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.46■■□□□ 1.03
Upf1Q9EPU0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Upf1Q9EPU0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Upf1Q9EPU0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Upf1Q9EPU0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Upf1Q9EPU0 Gm29518-201ENSMUST00000190858 372 ntBASIC21.45■■□□□ 1.02
Upf1Q9EPU0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.45■■□□□ 1.02
Upf1Q9EPU0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.45■■□□□ 1.02
Upf1Q9EPU0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Upf1Q9EPU0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.45■■□□□ 1.02
Upf1Q9EPU0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upf1Q9EPU0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upf1Q9EPU0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Upf1Q9EPU0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Upf1Q9EPU0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upf1Q9EPU0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upf1Q9EPU0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upf1Q9EPU0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upf1Q9EPU0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Upf1Q9EPU0 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.43■■□□□ 1.02
Upf1Q9EPU0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Upf1Q9EPU0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Upf1Q9EPU0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Upf1Q9EPU0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.43■■□□□ 1.02
Upf1Q9EPU0 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.43■■□□□ 1.02
Upf1Q9EPU0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Upf1Q9EPU0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Upf1Q9EPU0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Upf1Q9EPU0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC21.42■■□□□ 1.02
Upf1Q9EPU0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Upf1Q9EPU0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC21.42■■□□□ 1.02
Upf1Q9EPU0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.42■■□□□ 1.02
Upf1Q9EPU0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Upf1Q9EPU0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Upf1Q9EPU0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Upf1Q9EPU0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Upf1Q9EPU0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Upf1Q9EPU0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Upf1Q9EPU0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Upf1Q9EPU0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Upf1Q9EPU0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Upf1Q9EPU0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Upf1Q9EPU0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.41■■□□□ 1.02
Upf1Q9EPU0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.41■■□□□ 1.02
Upf1Q9EPU0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
Upf1Q9EPU0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Upf1Q9EPU0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Upf1Q9EPU0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upf1Q9EPU0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upf1Q9EPU0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upf1Q9EPU0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upf1Q9EPU0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upf1Q9EPU0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Upf1Q9EPU0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Upf1Q9EPU0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Upf1Q9EPU0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Upf1Q9EPU0 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.4■■□□□ 1.02
Upf1Q9EPU0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.4■■□□□ 1.02
Upf1Q9EPU0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upf1Q9EPU0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Upf1Q9EPU0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Upf1Q9EPU0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Upf1Q9EPU0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Upf1Q9EPU0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
Upf1Q9EPU0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Upf1Q9EPU0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Upf1Q9EPU0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Upf1Q9EPU0 Gm7063-201ENSMUST00000186840 981 ntBASIC21.39■■□□□ 1.01
Upf1Q9EPU0 AC132104.2-201ENSMUST00000215011 266 ntBASIC21.39■■□□□ 1.01
Upf1Q9EPU0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.38■■□□□ 1.01
Upf1Q9EPU0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upf1Q9EPU0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upf1Q9EPU0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Upf1Q9EPU0 Gm28659-201ENSMUST00000188013 759 ntBASIC21.38■■□□□ 1.01
Upf1Q9EPU0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Upf1Q9EPU0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upf1Q9EPU0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.38■■□□□ 1.01
Upf1Q9EPU0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upf1Q9EPU0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf1Q9EPU0 Gm9013-201ENSMUST00000132939 882 ntBASIC21.37■■□□□ 1.01
Upf1Q9EPU0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
Upf1Q9EPU0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
Upf1Q9EPU0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
Upf1Q9EPU0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
Upf1Q9EPU0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Upf1Q9EPU0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf1Q9EPU0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf1Q9EPU0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf1Q9EPU0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upf1Q9EPU0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf1Q9EPU0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Upf1Q9EPU0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf1Q9EPU0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf1Q9EPU0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf1Q9EPU0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Upf1Q9EPU0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upf1Q9EPU0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Upf1Q9EPU0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms