Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap3Q9D706 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap3Q9D706 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap3Q9D706 Gm12896-201ENSMUST00000118430 226 ntBASIC20.65■□□□□ 0.9
Rpap3Q9D706 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap3Q9D706 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap3Q9D706 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap3Q9D706 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rpap3Q9D706 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Rpap3Q9D706 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpap3Q9D706 Gm13168-201ENSMUST00000121771 632 ntBASIC20.64■□□□□ 0.89
Rpap3Q9D706 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpap3Q9D706 Gm27275-201ENSMUST00000184318 272 ntBASIC20.63■□□□□ 0.89
Rpap3Q9D706 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rpap3Q9D706 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap3Q9D706 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap3Q9D706 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpap3Q9D706 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rpap3Q9D706 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rpap3Q9D706 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpap3Q9D706 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpap3Q9D706 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpap3Q9D706 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpap3Q9D706 Dio3-201ENSMUST00000097228 1449 ntBASIC20.61■□□□□ 0.89
Rpap3Q9D706 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap3Q9D706 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.61■□□□□ 0.89
Rpap3Q9D706 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.61■□□□□ 0.89
Rpap3Q9D706 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpap3Q9D706 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rpap3Q9D706 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Rpap3Q9D706 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap3Q9D706 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap3Q9D706 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap3Q9D706 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap3Q9D706 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpap3Q9D706 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpap3Q9D706 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap3Q9D706 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap3Q9D706 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap3Q9D706 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap3Q9D706 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpap3Q9D706 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Rpap3Q9D706 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.58■□□□□ 0.88
Rpap3Q9D706 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpap3Q9D706 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpap3Q9D706 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Rpap3Q9D706 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap3Q9D706 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rpap3Q9D706 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rpap3Q9D706 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap3Q9D706 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap3Q9D706 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.57■□□□□ 0.88
Rpap3Q9D706 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.57■□□□□ 0.88
Rpap3Q9D706 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap3Q9D706 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.57■□□□□ 0.88
Rpap3Q9D706 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap3Q9D706 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rpap3Q9D706 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap3Q9D706 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpap3Q9D706 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rpap3Q9D706 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap3Q9D706 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap3Q9D706 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.56■□□□□ 0.88
Rpap3Q9D706 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap3Q9D706 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rpap3Q9D706 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap3Q9D706 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap3Q9D706 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpap3Q9D706 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpap3Q9D706 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rpap3Q9D706 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms