Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Serp2-204ENSMUST00000228055 705 ntBASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chaf1bQ9D0N7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Chaf1bQ9D0N7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1bQ9D0N7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1bQ9D0N7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Chaf1bQ9D0N7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1bQ9D0N7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1bQ9D0N7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1bQ9D0N7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1bQ9D0N7 Gm15546-201ENSMUST00000122095 826 ntBASIC17.52■□□□□ 0.4
Chaf1bQ9D0N7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.52■□□□□ 0.4
Chaf1bQ9D0N7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.52■□□□□ 0.4
Chaf1bQ9D0N7 Gm9959-201ENSMUST00000068277 390 ntBASIC17.52■□□□□ 0.4
Chaf1bQ9D0N7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1bQ9D0N7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chaf1bQ9D0N7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1bQ9D0N7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chaf1bQ9D0N7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chaf1bQ9D0N7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chaf1bQ9D0N7 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.5■□□□□ 0.39
Chaf1bQ9D0N7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.5■□□□□ 0.39
Chaf1bQ9D0N7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chaf1bQ9D0N7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
Chaf1bQ9D0N7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
Chaf1bQ9D0N7 Gm5812-201ENSMUST00000061073 957 ntBASIC17.5■□□□□ 0.39
Chaf1bQ9D0N7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms