Protein–RNA interactions for Protein: Q9CR09

Ufc1, Ubiquitin-fold modifier-conjugating enzyme 1, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufc1Q9CR09 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ufc1Q9CR09 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ufc1Q9CR09 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ufc1Q9CR09 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Grk6-206ENSMUST00000224995 2971 ntBASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ufc1Q9CR09 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ufc1Q9CR09 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms