Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdk5rap3Q99LM2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cdk5rap3Q99LM2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.34■□□□□ 0.69
Cdk5rap3Q99LM2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdk5rap3Q99LM2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdk5rap3Q99LM2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdk5rap3Q99LM2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cdk5rap3Q99LM2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdk5rap3Q99LM2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cdk5rap3Q99LM2 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.34■□□□□ 0.69
Cdk5rap3Q99LM2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdk5rap3Q99LM2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cdk5rap3Q99LM2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdk5rap3Q99LM2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdk5rap3Q99LM2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdk5rap3Q99LM2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cdk5rap3Q99LM2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.33■□□□□ 0.68
Cdk5rap3Q99LM2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdk5rap3Q99LM2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Cdk5rap3Q99LM2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdk5rap3Q99LM2 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.33■□□□□ 0.68
Cdk5rap3Q99LM2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdk5rap3Q99LM2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cdk5rap3Q99LM2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cdk5rap3Q99LM2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.32■□□□□ 0.68
Cdk5rap3Q99LM2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdk5rap3Q99LM2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Gm12821-201ENSMUST00000120022 600 ntBASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdk5rap3Q99LM2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdk5rap3Q99LM2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cdk5rap3Q99LM2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdk5rap3Q99LM2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdk5rap3Q99LM2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Cdk5rap3Q99LM2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cdk5rap3Q99LM2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdk5rap3Q99LM2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cdk5rap3Q99LM2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdk5rap3Q99LM2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdk5rap3Q99LM2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdk5rap3Q99LM2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Gm27454-201ENSMUST00000185090 204 ntBASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk5rap3Q99LM2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms