Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Gm18666-201ENSMUST00000190039 958 ntBASIC20.36■□□□□ 0.85
Pcdhac2Q91Y09 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhac2Q91Y09 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.36■□□□□ 0.85
Pcdhac2Q91Y09 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhac2Q91Y09 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhac2Q91Y09 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhac2Q91Y09 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhac2Q91Y09 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhac2Q91Y09 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhac2Q91Y09 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhac2Q91Y09 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.35■□□□□ 0.85
Pcdhac2Q91Y09 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.35■□□□□ 0.85
Pcdhac2Q91Y09 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhac2Q91Y09 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.35■□□□□ 0.85
Pcdhac2Q91Y09 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhac2Q91Y09 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhac2Q91Y09 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhac2Q91Y09 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhac2Q91Y09 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Gm13836-201ENSMUST00000121159 501 ntBASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhac2Q91Y09 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhac2Q91Y09 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhac2Q91Y09 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhac2Q91Y09 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhac2Q91Y09 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pcdhac2Q91Y09 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhac2Q91Y09 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.33■□□□□ 0.85
Pcdhac2Q91Y09 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.33■□□□□ 0.85
Pcdhac2Q91Y09 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhac2Q91Y09 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhac2Q91Y09 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhac2Q91Y09 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhac2Q91Y09 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhac2Q91Y09 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhac2Q91Y09 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 Gm37055-201ENSMUST00000191866 133 ntBASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhac2Q91Y09 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhac2Q91Y09 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhac2Q91Y09 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhac2Q91Y09 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhac2Q91Y09 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhac2Q91Y09 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhac2Q91Y09 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhac2Q91Y09 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhac2Q91Y09 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhac2Q91Y09 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhac2Q91Y09 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pcdhac2Q91Y09 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhac2Q91Y09 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhac2Q91Y09 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhac2Q91Y09 Gm15378-201ENSMUST00000121894 207 ntBASIC20.3■□□□□ 0.84
Pcdhac2Q91Y09 Gm13158-201ENSMUST00000122007 736 ntBASIC20.3■□□□□ 0.84
Pcdhac2Q91Y09 Mtag2-201ENSMUST00000058665 714 ntBASIC20.3■□□□□ 0.84
Pcdhac2Q91Y09 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhac2Q91Y09 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhac2Q91Y09 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhac2Q91Y09 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhac2Q91Y09 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhac2Q91Y09 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhac2Q91Y09 Gm11927-201ENSMUST00000118472 759 ntBASIC20.29■□□□□ 0.84
Pcdhac2Q91Y09 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhac2Q91Y09 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhac2Q91Y09 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pcdhac2Q91Y09 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhac2Q91Y09 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhac2Q91Y09 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhac2Q91Y09 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms