Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb22Q91XZ8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb22Q91XZ8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb22Q91XZ8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb22Q91XZ8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Pcdhb22Q91XZ8 Gm37179-201ENSMUST00000194862 823 ntBASIC21.85■■□□□ 1.09
Pcdhb22Q91XZ8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
Pcdhb22Q91XZ8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb22Q91XZ8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb22Q91XZ8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.85■■□□□ 1.09
Pcdhb22Q91XZ8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb22Q91XZ8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb22Q91XZ8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb22Q91XZ8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb22Q91XZ8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb22Q91XZ8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.84■■□□□ 1.09
Pcdhb22Q91XZ8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb22Q91XZ8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.84■■□□□ 1.09
Pcdhb22Q91XZ8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb22Q91XZ8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
Pcdhb22Q91XZ8 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhb22Q91XZ8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb22Q91XZ8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb22Q91XZ8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb22Q91XZ8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb22Q91XZ8 Golph3-205ENSMUST00000228671 2842 ntBASIC21.83■■□□□ 1.08
Pcdhb22Q91XZ8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.83■■□□□ 1.08
Pcdhb22Q91XZ8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb22Q91XZ8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Gm6365-201ENSMUST00000054711 744 ntBASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb22Q91XZ8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 Gm7290-201ENSMUST00000104990 617 ntBASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 Gm12918-201ENSMUST00000120234 636 ntBASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 Gm15710-201ENSMUST00000121821 636 ntBASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 Gm5075-201ENSMUST00000196916 622 ntBASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb22Q91XZ8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb22Q91XZ8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms