Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb2Q91XX7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Rps24-207ENSMUST00000224568 714 ntBASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb2Q91XX7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Gm14117-201ENSMUST00000122417 843 ntBASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb2Q91XX7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Pcdhgb2Q91XX7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Pcdhgb2Q91XX7 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.52■□□□□ 0.39
Pcdhgb2Q91XX7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgb2Q91XX7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgb2Q91XX7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgb2Q91XX7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgb2Q91XX7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb2Q91XX7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb2Q91XX7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb2Q91XX7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb2Q91XX7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms