Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdhgc3Q91XX1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgc3Q91XX1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhgc3Q91XX1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgc3Q91XX1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgc3Q91XX1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgc3Q91XX1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhgc3Q91XX1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Pcdhgc3Q91XX1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgc3Q91XX1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgc3Q91XX1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgc3Q91XX1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhgc3Q91XX1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgc3Q91XX1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgc3Q91XX1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgc3Q91XX1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgc3Q91XX1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgc3Q91XX1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgc3Q91XX1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgc3Q91XX1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhgc3Q91XX1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdhgc3Q91XX1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgc3Q91XX1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgc3Q91XX1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhgc3Q91XX1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Pcdhgc3Q91XX1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhgc3Q91XX1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhgc3Q91XX1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhgc3Q91XX1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhgc3Q91XX1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Pcdhgc3Q91XX1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgc3Q91XX1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhgc3Q91XX1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgc3Q91XX1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.58■□□□□ 0.4
Pcdhgc3Q91XX1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgc3Q91XX1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgc3Q91XX1 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.58■□□□□ 0.4
Pcdhgc3Q91XX1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
Pcdhgc3Q91XX1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgc3Q91XX1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgc3Q91XX1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.56■□□□□ 0.4
Pcdhgc3Q91XX1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgc3Q91XX1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgc3Q91XX1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgc3Q91XX1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgc3Q91XX1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.56■□□□□ 0.4
Pcdhgc3Q91XX1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhgc3Q91XX1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgc3Q91XX1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgc3Q91XX1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhgc3Q91XX1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhgc3Q91XX1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgc3Q91XX1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgc3Q91XX1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgc3Q91XX1 Serp2-204ENSMUST00000228055 705 ntBASIC17.54■□□□□ 0.4
Pcdhgc3Q91XX1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgc3Q91XX1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgc3Q91XX1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgc3Q91XX1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhgc3Q91XX1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgc3Q91XX1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms