Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Mir1199-201ENSMUST00000117015 119 ntBASIC18.49■□□□□ 0.55
Vsx1Q91V10 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.49■□□□□ 0.55
Vsx1Q91V10 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.49■□□□□ 0.55
Vsx1Q91V10 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Vsx1Q91V10 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vsx1Q91V10 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vsx1Q91V10 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vsx1Q91V10 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vsx1Q91V10 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vsx1Q91V10 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Vsx1Q91V10 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vsx1Q91V10 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vsx1Q91V10 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vsx1Q91V10 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.48■□□□□ 0.55
Vsx1Q91V10 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vsx1Q91V10 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vsx1Q91V10 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vsx1Q91V10 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Vsx1Q91V10 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vsx1Q91V10 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vsx1Q91V10 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vsx1Q91V10 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.47■□□□□ 0.55
Vsx1Q91V10 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vsx1Q91V10 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vsx1Q91V10 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Vsx1Q91V10 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vsx1Q91V10 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vsx1Q91V10 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.46■□□□□ 0.55
Vsx1Q91V10 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vsx1Q91V10 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vsx1Q91V10 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Gm10819-201ENSMUST00000099988 561 ntBASIC18.45■□□□□ 0.54
Vsx1Q91V10 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.45■□□□□ 0.54
Vsx1Q91V10 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.45■□□□□ 0.54
Vsx1Q91V10 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vsx1Q91V10 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Gm2399-201ENSMUST00000104944 225 ntBASIC18.44■□□□□ 0.54
Vsx1Q91V10 Gm15378-201ENSMUST00000121894 207 ntBASIC18.44■□□□□ 0.54
Vsx1Q91V10 Gm10231-201ENSMUST00000181584 441 ntBASIC18.44■□□□□ 0.54
Vsx1Q91V10 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Gm10175-202ENSMUST00000208752 441 ntBASIC18.44■□□□□ 0.54
Vsx1Q91V10 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vsx1Q91V10 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vsx1Q91V10 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vsx1Q91V10 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vsx1Q91V10 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vsx1Q91V10 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vsx1Q91V10 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Vsx1Q91V10 Gm44549-201ENSMUST00000208351 577 ntBASIC18.43■□□□□ 0.54
Vsx1Q91V10 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vsx1Q91V10 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Vsx1Q91V10 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Vsx1Q91V10 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vsx1Q91V10 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vsx1Q91V10 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vsx1Q91V10 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms