Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc71Q8VEG0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc71Q8VEG0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc71Q8VEG0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Gm15565-201ENSMUST00000118890 427 ntBASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc71Q8VEG0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc71Q8VEG0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.43■□□□□ 0.7
Ccdc71Q8VEG0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc71Q8VEG0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc71Q8VEG0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc71Q8VEG0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc71Q8VEG0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc71Q8VEG0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc71Q8VEG0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc71Q8VEG0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc71Q8VEG0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc71Q8VEG0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc71Q8VEG0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc71Q8VEG0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc71Q8VEG0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc71Q8VEG0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
Ccdc71Q8VEG0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc71Q8VEG0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc71Q8VEG0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc71Q8VEG0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc71Q8VEG0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc71Q8VEG0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc71Q8VEG0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc71Q8VEG0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc71Q8VEG0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccdc71Q8VEG0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc71Q8VEG0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.38■□□□□ 0.69
Ccdc71Q8VEG0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc71Q8VEG0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc71Q8VEG0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc71Q8VEG0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms