Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Chmp7Q8R1T1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Chmp7Q8R1T1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Chmp7Q8R1T1 Gm10698-201ENSMUST00000182663 604 ntBASIC23.97■■□□□ 1.43
Chmp7Q8R1T1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Chmp7Q8R1T1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Chmp7Q8R1T1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC23.97■■□□□ 1.43
Chmp7Q8R1T1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Chmp7Q8R1T1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chmp7Q8R1T1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC23.96■■□□□ 1.43
Chmp7Q8R1T1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chmp7Q8R1T1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Chmp7Q8R1T1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Chmp7Q8R1T1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Chmp7Q8R1T1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chmp7Q8R1T1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chmp7Q8R1T1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chmp7Q8R1T1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Chmp7Q8R1T1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 Gm13158-201ENSMUST00000122007 736 ntBASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 AC158538.1-201ENSMUST00000225870 294 ntBASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chmp7Q8R1T1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Chmp7Q8R1T1 Gm15378-201ENSMUST00000121894 207 ntBASIC23.94■■□□□ 1.42
Chmp7Q8R1T1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Chmp7Q8R1T1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC23.94■■□□□ 1.42
Chmp7Q8R1T1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Chmp7Q8R1T1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Chmp7Q8R1T1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chmp7Q8R1T1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Chmp7Q8R1T1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Chmp7Q8R1T1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Chmp7Q8R1T1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC23.92■■□□□ 1.42
Chmp7Q8R1T1 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.92■■□□□ 1.42
Chmp7Q8R1T1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chmp7Q8R1T1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chmp7Q8R1T1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Chmp7Q8R1T1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chmp7Q8R1T1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chmp7Q8R1T1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 H2-K2-201ENSMUST00000174250 1049 ntBASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Chmp7Q8R1T1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chmp7Q8R1T1 Gm715-201ENSMUST00000117865 831 ntBASIC23.9■■□□□ 1.42
Chmp7Q8R1T1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chmp7Q8R1T1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC23.9■■□□□ 1.42
Chmp7Q8R1T1 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.9■■□□□ 1.42
Chmp7Q8R1T1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chmp7Q8R1T1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Chmp7Q8R1T1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chmp7Q8R1T1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chmp7Q8R1T1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chmp7Q8R1T1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chmp7Q8R1T1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
Chmp7Q8R1T1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Chmp7Q8R1T1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Chmp7Q8R1T1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Chmp7Q8R1T1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Chmp7Q8R1T1 Flg-201ENSMUST00000050758 1488 ntBASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chmp7Q8R1T1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms