Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot6Q8K3P5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Cnot6Q8K3P5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.28■□□□□ 0.52
Cnot6Q8K3P5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot6Q8K3P5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot6Q8K3P5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot6Q8K3P5 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.28■□□□□ 0.52
Cnot6Q8K3P5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot6Q8K3P5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cnot6Q8K3P5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Gm8493-201ENSMUST00000196881 489 ntBASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Gm43173-201ENSMUST00000202246 593 ntBASIC18.27■□□□□ 0.52
Cnot6Q8K3P5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cnot6Q8K3P5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cnot6Q8K3P5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cnot6Q8K3P5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cnot6Q8K3P5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnot6Q8K3P5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cnot6Q8K3P5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cnot6Q8K3P5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cnot6Q8K3P5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnot6Q8K3P5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms