Protein–RNA interactions for Protein: Q8K3M1

Rdh16f2, Cis-retinol/3alpha hydroxysterol short-chain dehydrogenase-like protein, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh16f2Q8K3M1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f2Q8K3M1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f2Q8K3M1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f2Q8K3M1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rdh16f2Q8K3M1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.55■□□□□ 0.4
Rdh16f2Q8K3M1 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.55■□□□□ 0.4
Rdh16f2Q8K3M1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rdh16f2Q8K3M1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rdh16f2Q8K3M1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.52■□□□□ 0.4
Rdh16f2Q8K3M1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f2Q8K3M1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f2Q8K3M1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f2Q8K3M1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f2Q8K3M1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rdh16f2Q8K3M1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f2Q8K3M1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Rdh16f2Q8K3M1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.52■□□□□ 0.4
Rdh16f2Q8K3M1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f2Q8K3M1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rdh16f2Q8K3M1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rdh16f2Q8K3M1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rdh16f2Q8K3M1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rdh16f2Q8K3M1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rdh16f2Q8K3M1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f2Q8K3M1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f2Q8K3M1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f2Q8K3M1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f2Q8K3M1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f2Q8K3M1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f2Q8K3M1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rdh16f2Q8K3M1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Gm11249-201ENSMUST00000117071 859 ntBASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Gm15378-201ENSMUST00000121894 207 ntBASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Gm7977-201ENSMUST00000193787 748 ntBASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rdh16f2Q8K3M1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Gm13836-201ENSMUST00000121159 501 ntBASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rdh16f2Q8K3M1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rdh16f2Q8K3M1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms