Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mrpl47Q8K2Y7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mrpl47Q8K2Y7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Mrpl47Q8K2Y7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Mrpl47Q8K2Y7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Gm7860-201ENSMUST00000121190 879 ntBASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mrpl47Q8K2Y7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.5■□□□□ 0.55
Mrpl47Q8K2Y7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Smad6-203ENSMUST00000179458 273 ntBASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mrpl47Q8K2Y7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mrpl47Q8K2Y7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Gm27801-201ENSMUST00000184174 223 ntBASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mrpl47Q8K2Y7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mrpl47Q8K2Y7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.46■□□□□ 0.55
Mrpl47Q8K2Y7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Mrpl47Q8K2Y7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mrpl47Q8K2Y7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Mrpl47Q8K2Y7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Mrpl47Q8K2Y7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mrpl47Q8K2Y7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mrpl47Q8K2Y7 Gm13241-201ENSMUST00000094493 780 ntBASIC18.46■□□□□ 0.55
Mrpl47Q8K2Y7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mrpl47Q8K2Y7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Mrpl47Q8K2Y7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms