Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trpm6Q8CIR4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trpm6Q8CIR4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trpm6Q8CIR4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Trpm6Q8CIR4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trpm6Q8CIR4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trpm6Q8CIR4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trpm6Q8CIR4 Gm6576-201ENSMUST00000169678 883 ntBASIC18.81■□□□□ 0.6
Trpm6Q8CIR4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trpm6Q8CIR4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trpm6Q8CIR4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trpm6Q8CIR4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trpm6Q8CIR4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trpm6Q8CIR4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trpm6Q8CIR4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.79■□□□□ 0.6
Trpm6Q8CIR4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.79■□□□□ 0.6
Trpm6Q8CIR4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trpm6Q8CIR4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trpm6Q8CIR4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.79■□□□□ 0.6
Trpm6Q8CIR4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trpm6Q8CIR4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trpm6Q8CIR4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trpm6Q8CIR4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trpm6Q8CIR4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trpm6Q8CIR4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trpm6Q8CIR4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trpm6Q8CIR4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trpm6Q8CIR4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Trpm6Q8CIR4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trpm6Q8CIR4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trpm6Q8CIR4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trpm6Q8CIR4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trpm6Q8CIR4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trpm6Q8CIR4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.78■□□□□ 0.6
Trpm6Q8CIR4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.78■□□□□ 0.6
Trpm6Q8CIR4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.78■□□□□ 0.6
Trpm6Q8CIR4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trpm6Q8CIR4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trpm6Q8CIR4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trpm6Q8CIR4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trpm6Q8CIR4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.77■□□□□ 0.6
Trpm6Q8CIR4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trpm6Q8CIR4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trpm6Q8CIR4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.77■□□□□ 0.6
Trpm6Q8CIR4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trpm6Q8CIR4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Trpm6Q8CIR4 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.77■□□□□ 0.6
Trpm6Q8CIR4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Trpm6Q8CIR4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trpm6Q8CIR4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Gm15378-201ENSMUST00000121894 207 ntBASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trpm6Q8CIR4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 Mir1199-201ENSMUST00000117015 119 ntBASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trpm6Q8CIR4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trpm6Q8CIR4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trpm6Q8CIR4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trpm6Q8CIR4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trpm6Q8CIR4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trpm6Q8CIR4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Trpm6Q8CIR4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms