Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Ccdc28bQ8CEG5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc28bQ8CEG5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc28bQ8CEG5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc28bQ8CEG5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc28bQ8CEG5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Ccdc28bQ8CEG5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28bQ8CEG5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28bQ8CEG5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28bQ8CEG5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc28bQ8CEG5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28bQ8CEG5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ccdc28bQ8CEG5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc28bQ8CEG5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28bQ8CEG5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28bQ8CEG5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc28bQ8CEG5 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.39■□□□□ 0.53
Ccdc28bQ8CEG5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28bQ8CEG5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28bQ8CEG5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28bQ8CEG5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Ccdc28bQ8CEG5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28bQ8CEG5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28bQ8CEG5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28bQ8CEG5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc28bQ8CEG5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ccdc28bQ8CEG5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc28bQ8CEG5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc28bQ8CEG5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28bQ8CEG5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28bQ8CEG5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28bQ8CEG5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28bQ8CEG5 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.36■□□□□ 0.53
Ccdc28bQ8CEG5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc28bQ8CEG5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc28bQ8CEG5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc28bQ8CEG5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc28bQ8CEG5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc28bQ8CEG5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc28bQ8CEG5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc28bQ8CEG5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc28bQ8CEG5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc28bQ8CEG5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc28bQ8CEG5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms