Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrtm1Q8BXQ3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrtm1Q8BXQ3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrtm1Q8BXQ3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Lrtm1Q8BXQ3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrtm1Q8BXQ3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrtm1Q8BXQ3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lrtm1Q8BXQ3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.29■□□□□ 0.2
Lrtm1Q8BXQ3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lrtm1Q8BXQ3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrtm1Q8BXQ3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrtm1Q8BXQ3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrtm1Q8BXQ3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrtm1Q8BXQ3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrtm1Q8BXQ3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lrtm1Q8BXQ3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.28■□□□□ 0.2
Lrtm1Q8BXQ3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lrtm1Q8BXQ3 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.27■□□□□ 0.19
Lrtm1Q8BXQ3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrtm1Q8BXQ3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lrtm1Q8BXQ3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lrtm1Q8BXQ3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms