Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scfd1Q8BRF7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scfd1Q8BRF7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.44■■□□□ 1.02
Scfd1Q8BRF7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.44■■□□□ 1.02
Scfd1Q8BRF7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scfd1Q8BRF7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.42■■□□□ 1.02
Scfd1Q8BRF7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scfd1Q8BRF7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scfd1Q8BRF7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.42■■□□□ 1.02
Scfd1Q8BRF7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.42■■□□□ 1.02
Scfd1Q8BRF7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scfd1Q8BRF7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scfd1Q8BRF7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Scfd1Q8BRF7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scfd1Q8BRF7 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.41■■□□□ 1.02
Scfd1Q8BRF7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scfd1Q8BRF7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.41■■□□□ 1.02
Scfd1Q8BRF7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.41■■□□□ 1.02
Scfd1Q8BRF7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scfd1Q8BRF7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scfd1Q8BRF7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scfd1Q8BRF7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scfd1Q8BRF7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scfd1Q8BRF7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Scfd1Q8BRF7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scfd1Q8BRF7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scfd1Q8BRF7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.4■■□□□ 1.02
Scfd1Q8BRF7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
Scfd1Q8BRF7 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.4■■□□□ 1.02
Scfd1Q8BRF7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scfd1Q8BRF7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scfd1Q8BRF7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scfd1Q8BRF7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scfd1Q8BRF7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scfd1Q8BRF7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Scfd1Q8BRF7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scfd1Q8BRF7 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.38■■□□□ 1.01
Scfd1Q8BRF7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scfd1Q8BRF7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scfd1Q8BRF7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.38■■□□□ 1.01
Scfd1Q8BRF7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scfd1Q8BRF7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.38■■□□□ 1.01
Scfd1Q8BRF7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.38■■□□□ 1.01
Scfd1Q8BRF7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Scfd1Q8BRF7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scfd1Q8BRF7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Scfd1Q8BRF7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Gm11249-201ENSMUST00000117071 859 ntBASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Gm5643-201ENSMUST00000117081 966 ntBASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Gm10812-201ENSMUST00000099864 546 ntBASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scfd1Q8BRF7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scfd1Q8BRF7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scfd1Q8BRF7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Scfd1Q8BRF7 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.35■■□□□ 1.01
Scfd1Q8BRF7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scfd1Q8BRF7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.35■■□□□ 1.01
Scfd1Q8BRF7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scfd1Q8BRF7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scfd1Q8BRF7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scfd1Q8BRF7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scfd1Q8BRF7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Scfd1Q8BRF7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scfd1Q8BRF7 Gm2399-201ENSMUST00000104944 225 ntBASIC21.34■■□□□ 1.01
Scfd1Q8BRF7 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.34■■□□□ 1.01
Scfd1Q8BRF7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.34■■□□□ 1.01
Scfd1Q8BRF7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scfd1Q8BRF7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scfd1Q8BRF7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms