Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CtifQ6PEE2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CtifQ6PEE2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CtifQ6PEE2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CtifQ6PEE2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CtifQ6PEE2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CtifQ6PEE2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.93■□□□□ 0.78
CtifQ6PEE2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.93■□□□□ 0.78
CtifQ6PEE2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CtifQ6PEE2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CtifQ6PEE2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CtifQ6PEE2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.92■□□□□ 0.78
CtifQ6PEE2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CtifQ6PEE2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CtifQ6PEE2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CtifQ6PEE2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CtifQ6PEE2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CtifQ6PEE2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.92■□□□□ 0.78
CtifQ6PEE2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CtifQ6PEE2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CtifQ6PEE2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CtifQ6PEE2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.92■□□□□ 0.78
CtifQ6PEE2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CtifQ6PEE2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CtifQ6PEE2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.91■□□□□ 0.78
CtifQ6PEE2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CtifQ6PEE2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.91■□□□□ 0.78
CtifQ6PEE2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CtifQ6PEE2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.9■□□□□ 0.78
CtifQ6PEE2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CtifQ6PEE2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CtifQ6PEE2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CtifQ6PEE2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CtifQ6PEE2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CtifQ6PEE2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CtifQ6PEE2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CtifQ6PEE2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CtifQ6PEE2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CtifQ6PEE2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.87■□□□□ 0.77
CtifQ6PEE2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CtifQ6PEE2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CtifQ6PEE2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CtifQ6PEE2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CtifQ6PEE2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CtifQ6PEE2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CtifQ6PEE2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CtifQ6PEE2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CtifQ6PEE2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CtifQ6PEE2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.86■□□□□ 0.77
CtifQ6PEE2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.86■□□□□ 0.77
CtifQ6PEE2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CtifQ6PEE2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 173.3 ms