Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga7Q6DD96 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhga7Q6DD96 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhga7Q6DD96 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga7Q6DD96 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga7Q6DD96 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga7Q6DD96 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga7Q6DD96 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga7Q6DD96 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga7Q6DD96 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga7Q6DD96 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhga7Q6DD96 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga7Q6DD96 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.09■□□□□ 0.49
Pcdhga7Q6DD96 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhga7Q6DD96 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga7Q6DD96 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhga7Q6DD96 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.08■□□□□ 0.49
Pcdhga7Q6DD96 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.08■□□□□ 0.49
Pcdhga7Q6DD96 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Gm45417-201ENSMUST00000209533 758 ntBASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga7Q6DD96 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga7Q6DD96 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga7Q6DD96 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Gm40848-201ENSMUST00000221998 324 ntBASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga7Q6DD96 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Gm26833-201ENSMUST00000180899 440 ntBASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga7Q6DD96 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhga7Q6DD96 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms