Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cep290Q6A078 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cep290Q6A078 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cep290Q6A078 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cep290Q6A078 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cep290Q6A078 Gm3375-201ENSMUST00000203929 796 ntBASIC19.2■□□□□ 0.66
Cep290Q6A078 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.2■□□□□ 0.66
Cep290Q6A078 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cep290Q6A078 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cep290Q6A078 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cep290Q6A078 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cep290Q6A078 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cep290Q6A078 Gm28033-201ENSMUST00000184224 96 ntBASIC19.19■□□□□ 0.66
Cep290Q6A078 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cep290Q6A078 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cep290Q6A078 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Cep290Q6A078 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cep290Q6A078 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cep290Q6A078 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cep290Q6A078 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cep290Q6A078 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cep290Q6A078 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cep290Q6A078 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cep290Q6A078 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cep290Q6A078 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cep290Q6A078 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cep290Q6A078 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.18■□□□□ 0.66
Cep290Q6A078 Gm42545-201ENSMUST00000202755 922 ntBASIC19.18■□□□□ 0.66
Cep290Q6A078 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cep290Q6A078 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.18■□□□□ 0.66
Cep290Q6A078 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cep290Q6A078 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cep290Q6A078 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cep290Q6A078 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cep290Q6A078 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cep290Q6A078 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cep290Q6A078 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.17■□□□□ 0.66
Cep290Q6A078 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cep290Q6A078 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cep290Q6A078 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.17■□□□□ 0.66
Cep290Q6A078 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cep290Q6A078 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cep290Q6A078 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cep290Q6A078 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cep290Q6A078 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.17■□□□□ 0.66
Cep290Q6A078 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cep290Q6A078 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cep290Q6A078 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.16■□□□□ 0.66
Cep290Q6A078 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cep290Q6A078 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cep290Q6A078 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cep290Q6A078 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cep290Q6A078 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cep290Q6A078 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cep290Q6A078 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cep290Q6A078 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cep290Q6A078 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cep290Q6A078 Gm15375-201ENSMUST00000119510 849 ntBASIC19.15■□□□□ 0.66
Cep290Q6A078 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.15■□□□□ 0.66
Cep290Q6A078 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.15■□□□□ 0.66
Cep290Q6A078 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cep290Q6A078 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.15■□□□□ 0.66
Cep290Q6A078 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cep290Q6A078 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cep290Q6A078 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cep290Q6A078 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cep290Q6A078 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cep290Q6A078 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.15■□□□□ 0.66
Cep290Q6A078 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cep290Q6A078 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cep290Q6A078 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cep290Q6A078 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Cep290Q6A078 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Cep290Q6A078 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cep290Q6A078 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cep290Q6A078 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cep290Q6A078 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cep290Q6A078 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cep290Q6A078 Gm17661-201ENSMUST00000170317 270 ntBASIC19.14■□□□□ 0.65
Cep290Q6A078 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.14■□□□□ 0.65
Cep290Q6A078 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cep290Q6A078 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cep290Q6A078 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.13■□□□□ 0.65
Cep290Q6A078 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cep290Q6A078 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cep290Q6A078 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cep290Q6A078 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cep290Q6A078 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cep290Q6A078 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cep290Q6A078 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.13■□□□□ 0.65
Cep290Q6A078 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cep290Q6A078 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cep290Q6A078 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cep290Q6A078 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Cep290Q6A078 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Cep290Q6A078 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.12■□□□□ 0.65
Cep290Q6A078 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cep290Q6A078 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cep290Q6A078 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cep290Q6A078 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms