Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SpenQ62504 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.8■□□□□ 0.28
SpenQ62504 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SpenQ62504 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SpenQ62504 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SpenQ62504 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SpenQ62504 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SpenQ62504 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SpenQ62504 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SpenQ62504 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SpenQ62504 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SpenQ62504 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SpenQ62504 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SpenQ62504 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SpenQ62504 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SpenQ62504 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SpenQ62504 Gm6345-202ENSMUST00000180900 204 ntBASIC16.78■□□□□ 0.28
SpenQ62504 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SpenQ62504 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SpenQ62504 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.78■□□□□ 0.28
SpenQ62504 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.78■□□□□ 0.28
SpenQ62504 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SpenQ62504 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SpenQ62504 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SpenQ62504 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SpenQ62504 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SpenQ62504 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SpenQ62504 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SpenQ62504 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
SpenQ62504 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.77■□□□□ 0.28
SpenQ62504 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SpenQ62504 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SpenQ62504 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SpenQ62504 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SpenQ62504 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SpenQ62504 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.76■□□□□ 0.27
SpenQ62504 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SpenQ62504 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.76■□□□□ 0.27
SpenQ62504 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SpenQ62504 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SpenQ62504 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SpenQ62504 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SpenQ62504 Ank2-226ENSMUST00000189368 339 ntBASIC16.75■□□□□ 0.27
SpenQ62504 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.75■□□□□ 0.27
SpenQ62504 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SpenQ62504 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.75■□□□□ 0.27
SpenQ62504 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SpenQ62504 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SpenQ62504 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.75■□□□□ 0.27
SpenQ62504 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SpenQ62504 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SpenQ62504 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.75■□□□□ 0.27
SpenQ62504 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SpenQ62504 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.75■□□□□ 0.27
SpenQ62504 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SpenQ62504 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SpenQ62504 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SpenQ62504 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SpenQ62504 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SpenQ62504 Gm33142-201ENSMUST00000193913 867 ntBASIC16.74■□□□□ 0.27
SpenQ62504 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SpenQ62504 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SpenQ62504 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SpenQ62504 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SpenQ62504 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SpenQ62504 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.74■□□□□ 0.27
SpenQ62504 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SpenQ62504 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SpenQ62504 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SpenQ62504 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SpenQ62504 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SpenQ62504 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SpenQ62504 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SpenQ62504 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SpenQ62504 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SpenQ62504 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SpenQ62504 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SpenQ62504 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.72■□□□□ 0.27
SpenQ62504 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SpenQ62504 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.72■□□□□ 0.27
SpenQ62504 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.72■□□□□ 0.27
SpenQ62504 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 Gm23634-201ENSMUST00000175071 91 ntBASIC16.72■□□□□ 0.27
SpenQ62504 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SpenQ62504 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SpenQ62504 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SpenQ62504 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
SpenQ62504 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SpenQ62504 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SpenQ62504 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms