Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six3Q62233 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Six3Q62233 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Six3Q62233 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Six3Q62233 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.24■□□□□ 0.51
Six3Q62233 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Six3Q62233 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.24■□□□□ 0.51
Six3Q62233 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six3Q62233 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.24■□□□□ 0.51
Six3Q62233 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Six3Q62233 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Six3Q62233 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Six3Q62233 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six3Q62233 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six3Q62233 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.23■□□□□ 0.51
Six3Q62233 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.23■□□□□ 0.51
Six3Q62233 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Six3Q62233 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Six3Q62233 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six3Q62233 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Six3Q62233 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six3Q62233 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.22■□□□□ 0.51
Six3Q62233 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Six3Q62233 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.22■□□□□ 0.51
Six3Q62233 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six3Q62233 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six3Q62233 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six3Q62233 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Six3Q62233 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Six3Q62233 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six3Q62233 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Six3Q62233 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.22■□□□□ 0.51
Six3Q62233 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six3Q62233 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Six3Q62233 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six3Q62233 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six3Q62233 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six3Q62233 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.21■□□□□ 0.51
Six3Q62233 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.21■□□□□ 0.51
Six3Q62233 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six3Q62233 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.21■□□□□ 0.51
Six3Q62233 Gm43060-201ENSMUST00000200621 289 ntBASIC18.21■□□□□ 0.51
Six3Q62233 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.21■□□□□ 0.51
Six3Q62233 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six3Q62233 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Six3Q62233 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six3Q62233 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Six3Q62233 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Six3Q62233 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Six3Q62233 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Six3Q62233 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Six3Q62233 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Six3Q62233 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.2■□□□□ 0.5
Six3Q62233 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six3Q62233 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six3Q62233 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.2■□□□□ 0.5
Six3Q62233 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six3Q62233 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six3Q62233 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.2■□□□□ 0.5
Six3Q62233 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six3Q62233 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six3Q62233 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Six3Q62233 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Six3Q62233 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Six3Q62233 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.2■□□□□ 0.5
Six3Q62233 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.2■□□□□ 0.5
Six3Q62233 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six3Q62233 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six3Q62233 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six3Q62233 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.19■□□□□ 0.5
Six3Q62233 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six3Q62233 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six3Q62233 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.19■□□□□ 0.5
Six3Q62233 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six3Q62233 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six3Q62233 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Six3Q62233 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.19■□□□□ 0.5
Six3Q62233 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six3Q62233 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six3Q62233 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six3Q62233 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Six3Q62233 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six3Q62233 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Six3Q62233 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six3Q62233 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Six3Q62233 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six3Q62233 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.18■□□□□ 0.5
Six3Q62233 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Six3Q62233 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six3Q62233 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six3Q62233 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Six3Q62233 Grk6-206ENSMUST00000224995 2971 ntBASIC18.18■□□□□ 0.5
Six3Q62233 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.18■□□□□ 0.5
Six3Q62233 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six3Q62233 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six3Q62233 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms