Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.98■□□□□ 0.79
Six2Q62232 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Six2Q62232 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.97■□□□□ 0.79
Six2Q62232 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Six2Q62232 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.97■□□□□ 0.79
Six2Q62232 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six2Q62232 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six2Q62232 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six2Q62232 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six2Q62232 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.96■□□□□ 0.79
Six2Q62232 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.96■□□□□ 0.79
Six2Q62232 Gm10493-201ENSMUST00000097270 612 ntBASIC19.96■□□□□ 0.79
Six2Q62232 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six2Q62232 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six2Q62232 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.96■□□□□ 0.79
Six2Q62232 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six2Q62232 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.96■□□□□ 0.79
Six2Q62232 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Six2Q62232 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.95■□□□□ 0.78
Six2Q62232 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six2Q62232 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Six2Q62232 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six2Q62232 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Six2Q62232 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Six2Q62232 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Six2Q62232 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
Six2Q62232 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Six2Q62232 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.95■□□□□ 0.78
Six2Q62232 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Six2Q62232 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Six2Q62232 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.94■□□□□ 0.78
Six2Q62232 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six2Q62232 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six2Q62232 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six2Q62232 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Six2Q62232 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six2Q62232 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six2Q62232 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Six2Q62232 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.93■□□□□ 0.78
Six2Q62232 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six2Q62232 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Six2Q62232 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Six2Q62232 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Six2Q62232 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.93■□□□□ 0.78
Six2Q62232 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Six2Q62232 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six2Q62232 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six2Q62232 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six2Q62232 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six2Q62232 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six2Q62232 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six2Q62232 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six2Q62232 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Six2Q62232 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six2Q62232 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Six2Q62232 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Six2Q62232 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.92■□□□□ 0.78
Six2Q62232 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six2Q62232 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.92■□□□□ 0.78
Six2Q62232 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.92■□□□□ 0.78
Six2Q62232 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.92■□□□□ 0.78
Six2Q62232 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six2Q62232 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six2Q62232 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Six2Q62232 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six2Q62232 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Six2Q62232 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Six2Q62232 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six2Q62232 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.91■□□□□ 0.78
Six2Q62232 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six2Q62232 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six2Q62232 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Six2Q62232 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.91■□□□□ 0.78
Six2Q62232 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Six2Q62232 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six2Q62232 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.91■□□□□ 0.78
Six2Q62232 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Six2Q62232 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Six2Q62232 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.9■□□□□ 0.78
Six2Q62232 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.9■□□□□ 0.78
Six2Q62232 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Six2Q62232 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Six2Q62232 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.9■□□□□ 0.78
Six2Q62232 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms