Protein–RNA interactions for Protein: Q61644

Pacsin1, Protein kinase C and casein kinase substrate in neurons protein 1, mousemouse

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacsin1Q61644 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pacsin1Q61644 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pacsin1Q61644 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pacsin1Q61644 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.04■□□□□ 0.8
Pacsin1Q61644 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Rarb-207ENSMUST00000225921 2756 ntBASIC20.03■□□□□ 0.8
Pacsin1Q61644 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pacsin1Q61644 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Gm10493-201ENSMUST00000097270 612 ntBASIC20.03■□□□□ 0.8
Pacsin1Q61644 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pacsin1Q61644 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.02■□□□□ 0.8
Pacsin1Q61644 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pacsin1Q61644 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.02■□□□□ 0.8
Pacsin1Q61644 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pacsin1Q61644 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pacsin1Q61644 Gm18284-201ENSMUST00000172604 624 ntBASIC20.02■□□□□ 0.8
Pacsin1Q61644 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Pacsin1Q61644 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pacsin1Q61644 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pacsin1Q61644 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pacsin1Q61644 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pacsin1Q61644 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.02■□□□□ 0.79
Pacsin1Q61644 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Pacsin1Q61644 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pacsin1Q61644 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pacsin1Q61644 Gm7860-201ENSMUST00000121190 879 ntBASIC20.01■□□□□ 0.79
Pacsin1Q61644 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.01■□□□□ 0.79
Pacsin1Q61644 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.01■□□□□ 0.79
Pacsin1Q61644 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pacsin1Q61644 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pacsin1Q61644 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pacsin1Q61644 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pacsin1Q61644 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pacsin1Q61644 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pacsin1Q61644 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pacsin1Q61644 Grk6-206ENSMUST00000224995 2971 ntBASIC20■□□□□ 0.79
Pacsin1Q61644 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20■□□□□ 0.79
Pacsin1Q61644 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pacsin1Q61644 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20■□□□□ 0.79
Pacsin1Q61644 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pacsin1Q61644 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pacsin1Q61644 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pacsin1Q61644 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pacsin1Q61644 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pacsin1Q61644 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pacsin1Q61644 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pacsin1Q61644 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pacsin1Q61644 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pacsin1Q61644 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pacsin1Q61644 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Pacsin1Q61644 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pacsin1Q61644 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.97■□□□□ 0.79
Pacsin1Q61644 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.97■□□□□ 0.79
Pacsin1Q61644 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.97■□□□□ 0.79
Pacsin1Q61644 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pacsin1Q61644 Gm5874-201ENSMUST00000096101 508 ntBASIC19.97■□□□□ 0.79
Pacsin1Q61644 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pacsin1Q61644 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pacsin1Q61644 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pacsin1Q61644 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pacsin1Q61644 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pacsin1Q61644 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms