Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hif1aQ61221 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hif1aQ61221 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.82■□□□□ 0.6
Hif1aQ61221 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hif1aQ61221 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hif1aQ61221 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hif1aQ61221 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hif1aQ61221 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hif1aQ61221 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hif1aQ61221 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hif1aQ61221 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hif1aQ61221 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hif1aQ61221 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.81■□□□□ 0.6
Hif1aQ61221 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hif1aQ61221 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hif1aQ61221 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Hif1aQ61221 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hif1aQ61221 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hif1aQ61221 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hif1aQ61221 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Hif1aQ61221 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hif1aQ61221 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hif1aQ61221 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hif1aQ61221 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hif1aQ61221 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.8■□□□□ 0.6
Hif1aQ61221 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hif1aQ61221 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hif1aQ61221 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hif1aQ61221 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.8■□□□□ 0.6
Hif1aQ61221 Spcs1-204ENSMUST00000226782 949 ntBASIC18.8■□□□□ 0.6
Hif1aQ61221 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hif1aQ61221 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Hif1aQ61221 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hif1aQ61221 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hif1aQ61221 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hif1aQ61221 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hif1aQ61221 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hif1aQ61221 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hif1aQ61221 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hif1aQ61221 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hif1aQ61221 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hif1aQ61221 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hif1aQ61221 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.79■□□□□ 0.6
Hif1aQ61221 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hif1aQ61221 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hif1aQ61221 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.79■□□□□ 0.6
Hif1aQ61221 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hif1aQ61221 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hif1aQ61221 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hif1aQ61221 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.78■□□□□ 0.6
Hif1aQ61221 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Hif1aQ61221 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hif1aQ61221 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.78■□□□□ 0.6
Hif1aQ61221 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hif1aQ61221 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Hif1aQ61221 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hif1aQ61221 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hif1aQ61221 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hif1aQ61221 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hif1aQ61221 Gm21956-201ENSMUST00000179946 522 ntBASIC18.78■□□□□ 0.6
Hif1aQ61221 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hif1aQ61221 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hif1aQ61221 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hif1aQ61221 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hif1aQ61221 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Hif1aQ61221 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
Hif1aQ61221 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hif1aQ61221 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hif1aQ61221 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hif1aQ61221 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hif1aQ61221 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.77■□□□□ 0.6
Hif1aQ61221 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.77■□□□□ 0.6
Hif1aQ61221 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hif1aQ61221 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.77■□□□□ 0.6
Hif1aQ61221 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Hif1aQ61221 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hif1aQ61221 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Hif1aQ61221 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hif1aQ61221 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hif1aQ61221 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hif1aQ61221 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hif1aQ61221 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.76■□□□□ 0.59
Hif1aQ61221 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.76■□□□□ 0.59
Hif1aQ61221 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hif1aQ61221 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.76■□□□□ 0.59
Hif1aQ61221 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hif1aQ61221 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Hif1aQ61221 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hif1aQ61221 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hif1aQ61221 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hif1aQ61221 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.76■□□□□ 0.59
Hif1aQ61221 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hif1aQ61221 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hif1aQ61221 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hif1aQ61221 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hif1aQ61221 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hif1aQ61221 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hif1aQ61221 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hif1aQ61221 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hif1aQ61221 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms